RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 FAAP24Q9BTP7 215 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 MRPS18CQ9Y3D5 142 aaKnown RBP13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 TIMM10BQ9Y5J6 103 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 CSAG2Q9Y5P2 127 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 IGKV1-12A0A0C4DH73 117 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 CYTIPO60759 359 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 IGKV1D-12P01611 117 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 SERPINA5P05154 406 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 PGAM2P15259 253 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 TAS2R46P59540 309 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNF92Q03936 586 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 CHRFAM7AQ494W8 412 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 RIPPLY2Q5TAB7 128 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 STPG2Q8N412 459 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 ZBTB44Q8NCP5 570 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 NAXEQ8NCW5 288 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 BVESQ8NE79 360 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 CDC6Q99741 560 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 NMES1Q9C002 83 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 SLC25A32Q9H2D1 315 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 MYO7BQ6PIF6 2116 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNF883P0CG24 379 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 RRADP55042 308 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 FAM3AP98173 230 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 SRYQ05066 204 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 TSPO2Q5TGU0 170 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 TMEM42Q69YG0 159 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 EMG1Q92979 244 aaKnown RBP13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 CPNE4Q96A23 557 aaPredicted RBP13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 OR10C1Q96KK4 312 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 STRADBQ9C0K7 418 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 METTL9Q9H1A3 318 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 BARX1Q9HBU1 254 aaPredicted RBP13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 AHCTF1Q8WYP5 2266 aa13.32□□□□□ -0.28
CACNA1E-208ENST00000533229 TSPAN4O14817 238 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 MMP7P09237 267 aaPredicted RBP13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 RBP2P50120 134 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 RSU1Q15404 277 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 BRICD5Q6PL45 260 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 UNQ6126/PRO20091Q6UXV3 157 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 INO80EQ8NBZ0 244 aaPredicted RBP13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 CPEB3Q8NE35 698 aaKnown RBP13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 PXT1Q8NFP0 134 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 LIME1Q9H400 295 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 TRBV6-7A0A0A0MS04 114 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 hCG_38984A0A1B0GV85 526 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 CA11O75493 328 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 KNG1P01042 644 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 NRASP01111 189 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 CSTBP04080 98 aaKnown RBP13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 EDN3P14138 238 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 NUP62P37198 522 aaPredicted RBP13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 CDCP2Q5VXM1 449 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 MOB3CQ70IA8 216 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 OR2M7Q8NG81 312 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 DCUN1D4Q92564 292 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 DYRK2Q92630 601 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 SCGB3A2Q96PL1 93 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 AK3Q9UIJ7 227 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
CACNA1E-208ENST00000533229 F5H0A9 414 aaPredicted RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNF205O95201 554 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 CNN3Q15417 329 aaKnown RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 PIGYQ3MUY2 71 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 HSD17B13Q7Z5P4 300 aaPredicted RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNF2Q9BSG1 426 aaPredicted RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 ZNF703Q9H7S9 590 aaPredicted RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 NCOR1O75376 2440 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 A0A0B4J2A0 478 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 TERTO14746 1132 aaKnown RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 GEMIN2O14893 280 aaKnown RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 SLC34A2O95436 690 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 SFTPBP07988 381 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 PTGER4P35408 488 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 LHX2P50458 406 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 ARL6IP1Q15041 203 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 PABPC1L2AQ5JQF8 200 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 C9orf135Q5VTT2 229 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 EIF4E3Q8N5X7 224 aaKnown RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 SULT4A1Q9BR01 284 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 SLC7A10Q9NS82 523 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 PLA2G3Q9NZ20 509 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 OR5AC2Q9NZP5 309 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 BOKQ9UMX3 212 aaPredicted RBP13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 SESN1Q9Y6P5 492 aa13.3□□□□□ -0.28
CACNA1E-208ENST00000533229 MSGN1A6NI15 193 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms