RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 CEACAM21Q3KPI0 293 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 GALNTL6Q49A17 601 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 ZNF343Q6P1L6 599 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 FAHD1Q6P587 224 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 DRAM2Q6UX65 266 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 SYT10Q6XYQ8 523 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 GSTA5Q7RTV2 222 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 UBE2J2Q8N2K1 259 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 ATG16L2Q8NAA4 619 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 KCNG3Q8TAE7 436 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 RPL3LQ92901 407 aaKnown RBP1.2□□□□□ -2.22
KNL1-211ENST00000533001 LRRC46Q96FV0 321 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 MBOAT4Q96T53 435 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 EGLN3Q9H6Z9 239 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 SLC2A9Q9NRM0 540 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 PSG11Q9UQ72 335 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 TIMM10BQ9Y5J6 103 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 ENPP4Q9Y6X5 453 aa1.2□□□□□ -2.22
KNL1-211ENST00000533001 LRCOL1A6NCL2 159 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 DHRS7CA6NNS2 312 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 A8MWP6 167 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CCL24O00175 119 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 DIRAS1O95057 198 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 REG1AP05451 166 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CD79AP11912 226 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 H2AFXP16104 143 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ATP6V1B2P21281 511 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 PPIBP23284 216 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 FPR3P25089 353 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 HCCSP53701 268 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 SLURP1P55000 103 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 ALKBH2Q6NS38 261 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 BCDIN3DQ7Z5W3 292 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 MYLK4Q86YV6 388 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 APOBEC3DQ96AK3 386 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 THOC1Q96FV9 657 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 NKX3-1Q99801 234 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 FAM234AQ9H0X4 552 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 ANKRD19PQ9H560 264 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 MRPL36Q9P0J6 103 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ERVK-18Q9QC07 812 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 TSSC4Q9Y5U2 329 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 OBSCNQ5VST9 7968 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 FAM183AA6NL82 134 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CPSF4LA6NMK7 179 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 H3BUI4 141 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 SLC33A1O00400 549 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ADAM20O43506 726 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 GASTP01350 101 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 VSIG10L2P0DP72 767 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 TROVE2P10155 538 aaKnown RBP eCLIP1.19□□□□□ -2.22
KNL1-211ENST00000533001 LBPP18428 481 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 NTSP30990 170 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 RAD52P43351 418 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CLNS1AP54105 237 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ZNF85Q03923 595 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 LSAMPQ13449 338 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 WFDC2Q14508 124 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 ZNF124Q15973 351 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 SSX2Q16385 188 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CARD17Q5XLA6 110 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 TGIF2LXQ8IUE1 241 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 LYPD1Q8N2G4 141 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 FAM24BQ8N5W8 94 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CCNYL1Q8N7R7 359 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CYB561A3Q8NBI2 242 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 OR52H1Q8NGJ2 320 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 BBS10Q8TAM1 723 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CASTOR1Q8WTX7 329 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 TMEM170AQ8WVE7 144 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 GATAD2BQ8WXI9 593 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 MRRFQ96E11 262 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 REXO5Q96IC2 774 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 PGLYRP3Q96LB9 341 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 C1orf198Q9H425 327 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 ADGRL4Q9HBW9 690 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 IL1RAPQ9NPH3 570 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CMC2Q9NRP2 79 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 INIPQ9NRY2 104 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 CYSLTR2Q9NS75 346 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 RBFOX1Q9NWB1 397 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 RNF7Q9UBF6 113 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 IFT52Q9Y366 437 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 IGKV1D-8A0A087WSZ0 117 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 A0A087WUV0 522 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 M0R135 149 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 NDUFA2O43678 99 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 XPNPEP2O43895 674 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 SLC16A7O60669 478 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 SNUPNO95149 360 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 GCKP35557 465 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 TMEM50BP56557 158 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 KRTAP10-8P60410 259 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 PSMA6P60900 246 aaKnown RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ARSJQ5FYB0 599 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ZNF771Q7L3S4 317 aaPredicted RBP1.19□□□□□ -2.22
KNL1-211ENST00000533001 ANGPTL5Q86XS5 388 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 TMEM61Q8N0U2 210 aa1.19□□□□□ -2.22
KNL1-211ENST00000533001 LINC00612Q8N6U2 182 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms