RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PNMA8CA0A1B0GUJ8 204 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 ADAM20O43506 726 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 GYPAP02724 150 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 PITPNBP48739 271 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 MTCP1P56278 107 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 GNB2P62879 340 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 ACSM1Q08AH1 577 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 IRF3Q14653 427 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 SPHARQ15513 63 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 MED22Q15528 200 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 LHFPL2Q6ZUX7 228 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 RGP1Q92546 391 aaPredicted RBP17.38■□□□□ 0.37
CCS-207ENST00000531990 TMIGD2Q96BF3 282 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 OPALINQ96PE5 141 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 SSBP3Q9BWW4 388 aaPredicted RBP17.38■□□□□ 0.37
CCS-207ENST00000531990 HIF1ANQ9NWT6 349 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 RASL12Q9NYN1 266 aa17.38■□□□□ 0.37
CCS-207ENST00000531990 IGKV1-9A0A0C4DH69 117 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 INAFM1C9JVW0 142 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.37■□□□□ 0.37
CCS-207ENST00000531990 SYNGR1O43759 233 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 CYB5AP00167 134 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 CD1AP06126 327 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 MPZP25189 248 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 LCN2P80188 198 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 LYPD2Q6UXB3 125 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 ANGPTL5Q86XS5 388 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 CALHM1Q8IU99 346 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 POC1AQ8NBT0 407 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 TMEM106AQ96A25 262 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 WDR13Q9H1Z4 485 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 TMEM160Q9NX00 188 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 CLN8Q9UBY8 286 aa17.37■□□□□ 0.37
CCS-207ENST00000531990 SONP18583 2426 aaKnown RBP17.37■□□□□ 0.37
CCS-207ENST00000531990 DOCK11Q5JSL3 2073 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 A8MXK9 166 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 SULT1B1O43704 296 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 ALX3O95076 343 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 HCKP08631 526 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 PGA5P0DJD9 388 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 RAB3AP20336 220 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 GABARAPL2P60520 117 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 SEC61A1P61619 476 aaKnown RBP17.36■□□□□ 0.37
CCS-207ENST00000531990 IL24Q13007 206 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 SMIM21Q3B7S5 101 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 Q499Y3 187 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 SLC36A1Q7Z2H8 476 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 CPNE2Q96FN4 548 aaPredicted RBP17.36■□□□□ 0.37
CCS-207ENST00000531990 PGLYRP3Q96LB9 341 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 OR5M11Q96RB7 305 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 SNTG1Q9NSN8 517 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 NLKQ9UBE8 527 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 OR5V1Q9UGF6 321 aa17.36■□□□□ 0.37
CCS-207ENST00000531990 LSM2Q9Y333 95 aaKnown RBP17.36■□□□□ 0.37
CCS-207ENST00000531990 IGKV1-27A0A075B6S5 117 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 A0A0G2JMP0 313 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 A0A0X1KG70 313 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 NKX6-3A6NJ46 265 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 TMPRSS2O15393 492 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 MAGEB3O15480 346 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 NOS1APO75052 506 aaPredicted RBP17.35■□□□□ 0.37
CCS-207ENST00000531990 NXPH2O95156 264 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 PLATP00750 562 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 ACAA1P09110 424 aaPredicted RBP17.35■□□□□ 0.37
CCS-207ENST00000531990 HNF1AP20823 631 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 NPY4RP50391 375 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 MKXQ8IYA7 352 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 OR4M2Q8NGB6 313 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 OR13C5Q8NGS8 318 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 THRSPQ92748 146 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 SEH1LQ96EE3 360 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 YTHDF1Q9BYJ9 559 aaKnown RBP17.35■□□□□ 0.37
CCS-207ENST00000531990 DNTTIP1Q9H147 329 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 KAAG1Q9UBP8 84 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 LPAR3Q9UBY5 353 aa17.35■□□□□ 0.37
CCS-207ENST00000531990 SETD2Q9BYW2 2564 aaPredicted RBP17.35■□□□□ 0.37
CCS-207ENST00000531990 TRBV5-5A0A0J9YX44 114 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 TNFRSF13BO14836 293 aaPredicted RBP17.34■□□□□ 0.37
CCS-207ENST00000531990 PHF1O43189 567 aaPredicted RBP17.34■□□□□ 0.37
CCS-207ENST00000531990 MRPS14O60783 128 aaKnown RBP17.34■□□□□ 0.37
CCS-207ENST00000531990 GATA3P23771 443 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 ZFP36P26651 326 aaKnown RBP17.34■□□□□ 0.37
CCS-207ENST00000531990 POU3F4P49335 361 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 PPP3R1P63098 170 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 CR1LQ2VPA4 569 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 DCAF12L2Q5VW00 463 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 STUMQ69YW2 141 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 FAHD2BQ6P2I3 314 aaPredicted RBP17.34■□□□□ 0.37
CCS-207ENST00000531990 SLC25A26Q70HW3 274 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 FAHD2AQ96GK7 314 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 ZNF488Q96MN9 340 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 CCL13Q99616 98 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 SHARPINQ9H0F6 387 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 TAS2R4Q9NYW5 299 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 CKLFQ9UBR5 152 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 CDC42EP3Q9UKI2 254 aa17.34■□□□□ 0.37
CCS-207ENST00000531990 POLR3KQ9Y2Y1 108 aaPredicted RBP17.34■□□□□ 0.37
CCS-207ENST00000531990 PPIAL4CA0A0B4J2A2 164 aa17.33■□□□□ 0.36
CCS-207ENST00000531990 OR2AT4A6NND4 320 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms