RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 FCGR1BQ92637 280 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 C12orf43Q96C57 262 aaKnown RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 CPNE2Q96FN4 548 aaPredicted RBP12.82□□□□□ -0.36
CCS-206ENST00000530961 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 OPALINQ96PE5 141 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 NARFLQ9H6Q4 476 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 CKLFQ9UBR5 152 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
CCS-206ENST00000530961 RNF212BA8MTL3 300 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 ZNF879B4DU55 563 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 MAGEB3O15480 346 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 SULT1B1O43704 296 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 NOS1APO75052 506 aaPredicted RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 GPX5O75715 221 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 IGHV2-5P01817 119 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 CPEP16870 476 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 PSMA1P25786 263 aaKnown RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 MAPK3P27361 379 aaPredicted RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 RBMXP38159 391 aaKnown RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 PPP3R1P63098 170 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 IL24Q13007 206 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 TRAM1Q15629 374 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 SFRP4Q6FHJ7 346 aaPredicted RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 DCDC5Q6ZRR9 648 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 DEFB108BQ8NET1 73 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 METTL17Q9H7H0 456 aaPredicted RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 ZNF665Q9H7R5 613 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 PATZ1Q9HBE1 687 aaKnown RBP12.81□□□□□ -0.36
CCS-206ENST00000530961 RASL12Q9NYN1 266 aa12.81□□□□□ -0.36
CCS-206ENST00000530961 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 TRBV5-7A0A0A0MS05 114 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 B4DSR2 109 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 AKR7A2O43488 359 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 RHBDL1O75783 438 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 TNFAIP8O95379 198 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 GLRA1P23415 457 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 IL2RGP31785 369 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 UBE2UQ5VVX9 321 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 LIPKQ5VXJ0 399 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 ANGPTL5Q86XS5 388 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 CALHM1Q8IU99 346 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 LINC01356Q8N9X3 169 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 POC1AQ8NBT0 407 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 OR13C5Q8NGS8 318 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 OR14A2Q96R54 314 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 TMEM138Q9NPI0 162 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
CCS-206ENST00000530961 CEACAM18A8MTB9 384 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 CD5LO43866 347 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 LY6G6DO95868 133 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 CYB5AP00167 134 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 ALDOBP05062 364 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 HCKP08631 526 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 WNT2P09544 360 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 EGR1P18146 543 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 PCMT1P22061 227 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 CD80P33681 288 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 TGFBR2P37173 567 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 ACSM3Q53FZ2 586 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 ARMCX4Q5H9R4 360 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 UNQ9370/PRO34162Q6UXP9 181 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 FAM90A1Q86YD7 464 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 MKXQ8IYA7 352 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 PHYHIPQ92561 330 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 TMIGD2Q96BF3 282 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 DERL3Q96Q80 235 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 TAS2R4Q9NYW5 299 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
CCS-206ENST00000530961 F5H0A9 414 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 TNFRSF13BO14836 293 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 SYNGR1O43759 233 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 RPS2P15880 293 aaKnown RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 IGFBP3P17936 291 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 FSTP19883 344 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 PDZK1IP1Q13113 114 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 KISS1Q15726 138 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 ATPAF1Q5TC12 328 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 ASPHD2Q6ICH7 369 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 SLC25A26Q70HW3 274 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 MSI2Q96DH6 328 aaKnown RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 NEIL1Q96FI4 390 aaPredicted RBP12.78□□□□□ -0.36
CCS-206ENST00000530961 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 WDR13Q9H1Z4 485 aa12.78□□□□□ -0.36
CCS-206ENST00000530961 A0A087WXM4 84 aa12.77□□□□□ -0.37
CCS-206ENST00000530961 PIN1P1O15428 100 aa12.77□□□□□ -0.37
CCS-206ENST00000530961 FOXH1O75593 365 aa12.77□□□□□ -0.37
CCS-206ENST00000530961 SC5DO75845 299 aa12.77□□□□□ -0.37
CCS-206ENST00000530961 NXPH2O95156 264 aa12.77□□□□□ -0.37
CCS-206ENST00000530961 TGFAP01135 160 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms