RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 SP140LQ9H930 580 aa4.16□□□□□ -1.74
SF3B2-205ENST00000526653 NOP16Q9Y3C1 178 aaKnown RBP4.16□□□□□ -1.74
SF3B2-205ENST00000526653 LOC102723971A0A1B0GUV8 181 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 A6NIZ1 184 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 OR2AT4A6NND4 320 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 M0QX08 132 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 IMPA2O14732 288 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 SIGLEC5O15389 551 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 RIPK2O43353 540 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 RRP9O43818 475 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 IL6P05231 212 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 IGHV4-30-4P0DP06 118 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 GP9P14770 177 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 AZGP1P25311 298 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 CNTFRP26992 372 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 SLC6A1P30531 599 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 ENTPD1P49961 510 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 DYNLT3P51808 116 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 CAV3P56539 151 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 RAP1BP61224 184 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 LSM6P62312 80 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 RAP1AP62834 184 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 RPL31P62899 125 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 MZT1Q08AG7 82 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 KIR2DS1Q14954 304 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 HAGHQ16775 308 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 MEP1BQ16820 701 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 C8orf74Q6P047 294 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 PLBD1Q6P4A8 553 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 TSEN54Q7Z6J9 526 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 EGFL6Q8IUX8 553 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 LINC00471Q8N535 108 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 DPP10Q8N608 796 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 ZNF781Q8N8C0 355 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 ZBTB34Q8NCN2 500 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 OR5K1Q8NHB7 308 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 ANGPTL6Q8NI99 470 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 NDNFQ8TB73 568 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 TMEM255BQ8WV15 326 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 MPP4Q96JB8 637 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 RAB3IPQ96QF0 476 aaPredicted RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 PITX2Q99697 317 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 COQ7Q99807 217 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 SLC25A33Q9BSK2 321 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 ST6GALNAC5Q9BVH7 336 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 HIPK2Q9H2X6 1198 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 GRPEL1Q9HAV7 217 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 MRPL15Q9P015 296 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 POLR1DQ9Y2S0 133 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 TBL2Q9Y4P3 447 aaKnown RBP4.15□□□□□ -1.75
SF3B2-205ENST00000526653 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 DNAH10Q8IVF4 4471 aa4.15□□□□□ -1.75
SF3B2-205ENST00000526653 SORL1Q92673 2214 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 A0A1W2PPH5 198 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 ANKRD30BLA7E2S9 258 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 SERPINE3A8MV23 424 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 PTP4A3O75365 173 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 SPAG7O75391 227 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 KHDRBS3O75525 346 aaKnown RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 TSPAN19P0C672 248 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 PGA5P0DJD9 388 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 PIPP12273 146 aaPredicted RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 ANOS1P23352 680 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 MDH1P40925 334 aaKnown RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 POU3F4P49335 361 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 HIST1H3AP68431 136 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 PIN1Q13526 163 aaPredicted RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 SCARB2Q14108 478 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 KRT72Q14CN4 511 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 SNAI3Q3KNW1 292 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 GLYATL3Q5SZD4 288 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 GCNT6Q5T4J0 391 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 HIST2H3PS2Q5TEC6 136 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 TMPRSS11FQ6ZWK6 438 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 HIST2H3AQ71DI3 136 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 LINC00346Q8IVM7 164 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 GPR32P1Q8NGA4 272 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 OR13D1Q8NGV5 346 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 OR4Q3Q8NH05 313 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 OR8U1Q8NH10 309 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 TMEM239Q8WW34 195 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 RPL3LQ92901 407 aaKnown RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 ST6GALNAC6Q969X2 333 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 Q96M85 177 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 RBM14Q96PK6 669 aaKnown RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 ATF6BQ99941 703 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 ZNF426Q9BUY5 554 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 PAIP1Q9H074 479 aaKnown RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 NSRP1Q9H0G5 558 aaKnown RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 HDHD2Q9H0R4 259 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 DNTTIP1Q9H147 329 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 C1orf21Q9H246 121 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 WDR55Q9H6Y2 383 aaPredicted RBP4.14□□□□□ -1.75
SF3B2-205ENST00000526653 RETNQ9HD89 108 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 AIG1Q9NVV5 245 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 USE1Q9NZ43 259 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 KIAA1456Q9P272 454 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 NLKQ9UBE8 527 aa4.14□□□□□ -1.75
SF3B2-205ENST00000526653 GRHPRQ9UBQ7 328 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms