RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 VSIG10L2P0DP72 767 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 CCL3L1P16619 93 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 RAB13P51153 203 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 ZNF273Q14593 569 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 NSUN5P1Q3KNT7 163 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 C11orf87Q6NUJ2 197 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 OR6N2Q8NGY6 317 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 SDSLQ96GA7 329 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 ZNF488Q96MN9 340 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 CITED2Q99967 270 aaPredicted RBP11.53□□□□□ -0.56
CPSF1-201ENST00000526271 MICU1Q9BPX6 476 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 GABARAPL3Q9BY60 117 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
CPSF1-201ENST00000526271 ENOPH1Q9UHY7 261 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
CPSF1-201ENST00000526271 A0A1W2PQ09 198 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 TMEM210A6NLX4 147 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 SELENOFO60613 162 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 EPHA2P29317 976 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.57
CPSF1-201ENST00000526271 GPM6AP51674 278 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 LOXL3P58215 753 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 IL5RAQ01344 420 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 GINS1Q14691 196 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 PTGES3Q15185 160 aaKnown RBP11.52□□□□□ -0.57
CPSF1-201ENST00000526271 LRRC36Q1X8D7 754 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 TMEM200BQ69YZ2 307 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.57
CPSF1-201ENST00000526271 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 CSNK2A3Q8NEV1 391 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 OR52L1Q8NGH7 329 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 OR51G2Q8NGK0 314 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 OR4C13Q8NGP0 309 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 PIGCQ92535 297 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 PPP1R14AQ96A00 147 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 RNF170Q96K19 258 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 INTS14Q96SY0 518 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 RTL8AQ9BWD3 113 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 OR10A2Q9H208 303 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 SLC25A19Q9HC21 320 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 CMC2Q9NRP2 79 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 TBC1D23Q9NUY8 699 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 BAIAP2Q9UQB8 552 aa11.52□□□□□ -0.57
CPSF1-201ENST00000526271 SF3B6Q9Y3B4 125 aaKnown RBP11.52□□□□□ -0.57
CPSF1-201ENST00000526271 NKX6-3A6NJ46 265 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 ZAR1LA6NP61 321 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 H3BN98 237 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 K7EIL1 84 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 MTRF1O75570 445 aaKnown RBP11.51□□□□□ -0.57
CPSF1-201ENST00000526271 IGLV3-1P01715 115 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 GLRA1P23415 457 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 POU1F1P28069 291 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 GSTT1P30711 240 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 POLR2IP36954 125 aaKnown RBP11.51□□□□□ -0.57
CPSF1-201ENST00000526271 SLC15A1P46059 708 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 GABRA2P47869 451 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 HCCSP53701 268 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 AANATQ16613 207 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 ZBTB37Q5TC79 503 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 FOXB2Q5VYV0 432 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 TMEM185AQ8NFB2 350 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 OR2T33Q8NG76 320 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 OR52H1Q8NGJ2 320 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 TEX47Q8TBZ9 253 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 AQP3Q92482 292 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 MED30Q96HR3 178 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 PGAM5Q96HS1 289 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 CDCA4Q9BXL8 241 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 NECAP2Q9NVZ3 263 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 ORC6Q9Y5N6 252 aa11.51□□□□□ -0.57
CPSF1-201ENST00000526271 A6NDX4 124 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 H0YJX3 145 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 SYNGR1O43759 233 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 GLCEO94923 617 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 HMGN1P05114 100 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 COX7A1P24310 79 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 HSD11B1P28845 292 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 GNALP38405 381 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 EFNB1P98172 346 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 ZIK1Q3SY52 487 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-201ENST00000526271 PLA1AQ53H76 456 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 TCTEX1D4Q5JR98 221 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 CEP78Q5JTW2 689 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 TMEM236Q5W0B7 351 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 ZDHHC23Q8IYP9 409 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 BBS1Q8NFJ9 593 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 OTOSQ8NHW6 89 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 MBOAT4Q96T53 435 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 RGCCQ9H4X1 137 aa11.5□□□□□ -0.57
CPSF1-201ENST00000526271 SMPD3Q9NY59 655 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-201ENST00000526271 DYNC2H1Q8NCM8 4307 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms