RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 DOCK11Q5JSL3 2073 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 ABCA1O95477 2261 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 OOEPA6NGQ2 149 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.4■□□□□ 0.38
CD44-222ENST00000526025 CCRL2O00421 344 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 MAGEB3O15480 346 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 NDUFA2O43678 99 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 PGA5P0DJD9 388 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 TGFBR2P37173 567 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 MTCP1P56278 107 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 SSX1Q16384 188 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 CALHM1Q8IU99 346 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 POC1AQ8NBT0 407 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 CLDND2Q8NHS1 167 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 RAB39BQ96DA2 213 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 C1orf159Q96HA4 380 aa17.4■□□□□ 0.38
CD44-222ENST00000526025 ISPDA4D126 451 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 PIN1P1O15428 100 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 RHBDL1O75783 438 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 RGS9O75916 674 aaPredicted RBP17.39■□□□□ 0.37
CD44-222ENST00000526025 INMTO95050 263 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 HCKP08631 526 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 UCHL1P09936 223 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 EGR1P18146 543 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 PSMB9P28065 219 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 LMO4P61968 165 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 RPS25P62851 125 aaKnown RBP17.39■□□□□ 0.37
CD44-222ENST00000526025 HNRNPA0Q13151 305 aaKnown RBP17.39■□□□□ 0.37
CD44-222ENST00000526025 CD200R1LQ6Q8B3 271 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 FAM90A1Q86YD7 464 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 CDH26Q8IXH8 852 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 ZSCAN4Q8NAM6 433 aaPredicted RBP17.39■□□□□ 0.37
CD44-222ENST00000526025 OR51A2Q8NGJ7 313 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 MUL1Q969V5 352 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 GAL3ST1Q99999 423 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 METTL17Q9H7H0 456 aaPredicted RBP17.39■□□□□ 0.37
CD44-222ENST00000526025 NOX4Q9NPH5 578 aa17.39■□□□□ 0.37
CD44-222ENST00000526025 ZANQ9Y493 2812 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 WNT9BO14905 357 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 SYNGR1O43759 233 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 IGHV2-5P01817 119 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 INHBBP09529 407 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 BDKRB2P30411 391 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 PDZK1IP1Q13113 114 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 KISS1Q15726 138 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 MICBQ29980 383 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 TMEM249Q2WGJ8 235 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 FAM201AQ5SY85 155 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 CRIP3Q6Q6R5 217 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 TMEM91Q6ZNR0 172 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 CEACAM19Q7Z692 300 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 ANGPTL5Q86XS5 388 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 MKXQ8IYA7 352 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 Q8IYB0 196 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 SAXO1Q8IYX7 474 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 NRIP2Q9BQI9 281 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 RHOFQ9HBH0 211 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 HES4Q9HCC6 221 aa17.38■□□□□ 0.37
CD44-222ENST00000526025 TRAV8-7A0A075B6U6 113 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 MEGF11A6BM72 1044 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 F5H0A9 414 aaPredicted RBP17.37■□□□□ 0.37
CD44-222ENST00000526025 ARL6IP5O75915 188 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 CYB5AP00167 134 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 JUNBP17275 347 aaPredicted RBP17.37■□□□□ 0.37
CD44-222ENST00000526025 GLRA1P23415 457 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 CD80P33681 288 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 ERVK11-1P61568 191 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 SMIM21Q3B7S5 101 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 NKAIN3Q8N8D7 197 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 TMEM203Q969S6 136 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 TMEM246Q9BRR3 403 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 DNTTIP1Q9H147 329 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 ZNF665Q9H7R5 613 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 PATZ1Q9HBE1 687 aaKnown RBP17.37■□□□□ 0.37
CD44-222ENST00000526025 MIOXQ9UGB7 285 aa17.37■□□□□ 0.37
CD44-222ENST00000526025 CSPG4Q6UVK1 2322 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 TRDV1A0A1B0GX56 115 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 CEACAM18A8MTB9 384 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 TNFRSF13BO14836 293 aaPredicted RBP17.36■□□□□ 0.37
CD44-222ENST00000526025 AKR7A2O43488 359 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 RBMXP38159 391 aaKnown RBP17.36■□□□□ 0.37
CD44-222ENST00000526025 GZMKP49863 264 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 GP2P55259 537 aaKnown RBP17.36■□□□□ 0.37
CD44-222ENST00000526025 ZP1P60852 638 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 FABP5Q01469 135 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 NEDD8Q15843 81 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 HSD17B12Q53GQ0 312 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 ATPAF1Q5TC12 328 aaPredicted RBP17.36■□□□□ 0.37
CD44-222ENST00000526025 DDI2Q5TDH0 399 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 SLC25A26Q70HW3 274 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 BOLLQ8N9W6 283 aaKnown RBP17.36■□□□□ 0.37
CD44-222ENST00000526025 OR52N4Q8NGI2 321 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 TMIGD2Q96BF3 282 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 CEP19Q96LK0 163 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 KAAG1Q9UBP8 84 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 PCDHB10Q9UN67 800 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 TLN2Q9Y4G6 2542 aa17.36■□□□□ 0.37
CD44-222ENST00000526025 A0A1W2PPK0 400 aa17.35■□□□□ 0.37
CD44-222ENST00000526025 C3orf80F5H4A9 247 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms