RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CEP78Q5JTW2 689 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 UTS2BQ765I0 119 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 C8orf59Q8N0T1 100 aaPredicted RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 DNAAF1Q8NEP3 725 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 AQP3Q92482 292 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 RPL3LQ92901 407 aaKnown RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 NUDT16L1Q9BRJ7 211 aaKnown RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 PKIBQ9C010 78 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 MS4A7Q9GZW8 240 aaPredicted RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 AMBNQ9NP70 447 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 CNOT2Q9NZN8 540 aaKnown RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 CTSZQ9UBR2 303 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 AASSQ9UDR5 926 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 HHLA2Q9UM44 414 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 DIMT1Q9UNQ2 313 aaKnown RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 SLC7A11Q9UPY5 501 aa8.68□□□□□ -1.02
RBBP4-216ENST00000525506 CAB39Q9Y376 341 aaPredicted RBP8.68□□□□□ -1.02
RBBP4-216ENST00000525506 TRAV40A0A0B4J280 105 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 MDFIC2A0A1B0GVS7 189 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 DNAJC9-AS1A6NH13 148 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 NKX6-3A6NJ46 265 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 J3QLW9 94 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 TMPRSS2O15393 492 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 FCN3O75636 299 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 ALX3O95076 343 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 GYPAP02724 150 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 MT-ND2P03891 347 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 LIMS3P0CW19 117 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 LIMS4P0CW20 117 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 PGA5P0DJD9 388 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 ZNF19P17023 458 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 MYL12AP19105 171 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 FUT6P51993 359 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 GBX2P52951 348 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-216ENST00000525506 NANOS3P60323 173 aaKnown RBP8.67□□□□□ -1.02
RBBP4-216ENST00000525506 FGF12P61328 243 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 IL24Q13007 206 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 ALKBH1Q13686 389 aaKnown RBP8.67□□□□□ -1.02
RBBP4-216ENST00000525506 SMIM21Q3B7S5 101 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 HAGHLQ6PII5 290 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-216ENST00000525506 BRD3OSQ6XYD6 125 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 TMPRSS11AQ6ZMR5 421 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 MOB3CQ70IA8 216 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 LHFPL3Q86UP9 236 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 FGFRL1Q8N441 504 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 C3orf56Q8N813 242 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 PNLDC1Q8NA58 520 aaKnown RBP8.67□□□□□ -1.02
RBBP4-216ENST00000525506 POC1AQ8NBT0 407 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 CNIH3Q8TBE1 160 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 RPS4Y2Q8TD47 263 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 TFAP2CQ92754 450 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 SPSB1Q96BD6 273 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 UPRTQ96BW1 309 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 MED30Q96HR3 178 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 VCX3BQ9H321 246 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 SMURF1Q9HCE7 757 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 PLCXD1Q9NUJ7 323 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 DNAJB11Q9UBS4 358 aa8.67□□□□□ -1.02
RBBP4-216ENST00000525506 EXOSC1Q9Y3B2 195 aaKnown RBP8.67□□□□□ -1.02
RBBP4-216ENST00000525506 A0A1B0GW55 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 EFCAB10A6NFE3 127 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 CLIC3O95833 236 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L2P0CJ85 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L3P0CJ86 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L4P0CJ87 422 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L5P0CJ88 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L6P0CJ89 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L7P0CJ90 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 PRKACBP22694 351 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 GLRA1P23415 457 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 HAAOP46952 286 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 COMPP49747 757 aaPredicted RBP8.66□□□□□ -1.02
RBBP4-216ENST00000525506 CAV3P56539 151 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 BPIFB3P59826 476 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 BAMBIQ13145 260 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 SMN1Q16637 294 aaKnown RBP8.66□□□□□ -1.02
RBBP4-216ENST00000525506 AWAT1Q58HT5 328 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 RPL22L1Q6P5R6 122 aaKnown RBP8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
RBBP4-216ENST00000525506 RBMS3Q6XE24 437 aaKnown RBP8.66□□□□□ -1.02
RBBP4-216ENST00000525506 ZNF788Q6ZQV5 615 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 Q8IYB0 196 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 OR52N1Q8NH53 320 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 ANGPTL6Q8NI99 470 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 TMIGD2Q96BF3 282 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 SEH1LQ96EE3 360 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 NRIP2Q9BQI9 281 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 COMMD4Q9H0A8 199 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 ISG20L2Q9H9L3 353 aaKnown RBP8.66□□□□□ -1.02
RBBP4-216ENST00000525506 NEK6Q9HC98 313 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 GPR173Q9NS66 373 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 NLKQ9UBE8 527 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 DUX4Q9UBX2 424 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 ZNF222Q9UK12 451 aa8.66□□□□□ -1.02
RBBP4-216ENST00000525506 ERICH4A6NGS2 130 aa8.65□□□□□ -1.02
RBBP4-216ENST00000525506 OR2AT4A6NND4 320 aa8.65□□□□□ -1.02
RBBP4-216ENST00000525506 DVL1O14640 695 aa8.65□□□□□ -1.02
RBBP4-216ENST00000525506 SIGLEC5O15389 551 aa8.65□□□□□ -1.02
RBBP4-216ENST00000525506 AKR7A2O43488 359 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms