RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TESMINQ9Y4I5 508 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 QSER1Q2KHR3 1735 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 TRPM1Q7Z4N2 1603 aa3.66□□□□□ -1.82
CD44-213ENST00000525209 ITGB4P16144 1822 aa3.65□□□□□ -1.82
CD44-213ENST00000525209 A0A1W2PP64 1363 aa3.65□□□□□ -1.82
CD44-213ENST00000525209 SBF1O95248 1867 aa3.65□□□□□ -1.82
CD44-213ENST00000525209 PKD1L3Q7Z443 1732 aa3.65□□□□□ -1.82
CD44-213ENST00000525209 IGLV5-45A0A087WSX0 123 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 IGLV5-52A0A0A0MRZ9 124 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 IGHV4-61A0A0C4DH41 118 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 TRBV5-4A0A0C4DH59 114 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 A0A1B0GVT2 93 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 RFPL4AA6NLU0 287 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ZNF705EA8MWA4 302 aaPredicted RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 LINC00587B1AMM8 73 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 PPP5D1E7EU14 171 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 F6UB75 175 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 RFPL4AL1F8VTS6 287 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 KPNA4O00629 521 aaPredicted RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 TCAPO15273 167 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 RP2O75695 350 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 CCNKO75909 580 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 S1PR2O95136 353 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 SOX14O95416 240 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 TTC4O95801 387 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 LALBAP00709 142 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 IGHV4-59P01825 116 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 HCKP08631 526 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 FCGR3AP08637 254 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 OR9G9P0C7N8 305 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 PGA4P0DJD7 388 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 PGA3P0DJD8 388 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 MYL12AP19105 171 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 OPRL1P41146 370 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 PAX9P55771 341 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 BIDP55957 195 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 VSX2P58304 361 aaPredicted RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 ESRRGP62508 458 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ZNF92Q03936 586 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 PPP1R1AQ13522 171 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 FASTKQ14296 549 aaKnown RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 KCNJ11Q14654 390 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ECSCRQ19T08 205 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 CLEC12BQ2HXU8 276 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 NSUN5P1Q3KNT7 163 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ARHGAP11BQ3KRB8 267 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 TMEM30BQ3MIR4 351 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 TFDP3Q5H9I0 405 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 LY6G5CQ5SRR4 150 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 REP15Q6BDI9 236 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 Q6ZVH6 145 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 FAM231DQ6ZW35 169 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 FAM220AQ7Z4H9 259 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 GLT6D1Q7Z4J2 308 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 UBL4BQ8N7F7 174 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 SAMD12Q8N8I0 201 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 OR10R2Q8NGX6 335 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ZFAND1Q8TCF1 268 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 C11orf40Q8WZ69 217 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 UCN3Q969E3 161 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 TMBIM1Q969X1 311 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 CLDN23Q96B33 292 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 SLC25A38Q96DW6 304 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 WWC2-AS2Q96NR7 200 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 OLFM3Q96PB7 478 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 QKIQ96PU8 341 aaKnown RBP eCLIP3.65□□□□□ -1.83
CD44-213ENST00000525209 MED18Q9BUE0 208 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 WDR13Q9H1Z4 485 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 OR51I1Q9H343 314 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 CLMPQ9H6B4 373 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 WDR41Q9HAD4 459 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 B3GAT2Q9NPZ5 323 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 TMEM9BQ9NQ34 198 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 BIN3Q9NQY0 253 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 DDIT4Q9NX09 232 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 ARMCX1Q9P291 453 aa3.65□□□□□ -1.83
CD44-213ENST00000525209 C14orf166Q9Y224 244 aaKnown RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 CICQ96RK0 1608 aaPredicted RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 TNRC6CQ9HCJ0 1690 aaKnown RBP3.65□□□□□ -1.83
CD44-213ENST00000525209 ANKRD36BQ8N2N9 1353 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 C4BP0C0L5 1744 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 SPATA31E1Q6ZUB1 1445 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 NSD3Q9BZ95 1437 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IGKV1D-8A0A087WSZ0 117 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IQCMA0A1B0GVH7 501 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IGLON5A6NGN9 336 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 DHRS7CA6NNS2 312 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 INAFM1C9JVW0 142 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 MFNGO00587 321 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 CDX4O14627 284 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 CHP2O43745 196 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 CST8O60676 142 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 FRAT2O75474 233 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 FOXH1O75593 365 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IFNA1P01562 189 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 IGHV3-9P01782 118 aa3.64□□□□□ -1.83
CD44-213ENST00000525209 KLK3P07288 261 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 GIPP09681 153 aaPredicted RBP3.64□□□□□ -1.83
CD44-213ENST00000525209 PGA5P0DJD9 388 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms