RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TMIGD2Q96BF3 282 aa17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 CCL13Q99616 98 aa17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 AMBNQ9NP70 447 aa17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 GPR173Q9NS66 373 aa17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 RPUSD1Q9UJJ7 312 aaKnown RBP17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 ZNF222Q9UK12 451 aa17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 HHLA2Q9UM44 414 aa17.31■□□□□ 0.36
TRAPPC9-215ENST00000524162 ZNF879B4DU55 563 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 SIGLEC5O15389 551 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 NDUFB3O43676 98 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 CNN3Q15417 329 aaKnown RBP17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 BTN2A1Q7KYR7 527 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 LHFPL3Q86UP9 236 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 BPIFB2Q8N4F0 458 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 SDSLQ96GA7 329 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 NRIP2Q9BQI9 281 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 VCXQ9H320 206 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 HES4Q9HCC6 221 aa17.3■□□□□ 0.36
TRAPPC9-215ENST00000524162 TMEM212A6NML5 194 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 ALX3O95076 343 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 CCDC159P0C7I6 412 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 LIMS3P0CW19 117 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 LIMS4P0CW20 117 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 MMP9P14780 707 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 ERVK11-1P61568 191 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 UBE2V2Q15819 145 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 ODF4Q2M2E3 257 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 CCDC58Q4VC31 144 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 ACP7Q6ZNF0 438 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 CYGBQ8WWM9 190 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 SEH1LQ96EE3 360 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 GAFA1Q96PS6 74 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 SEBOXQ9HB31 216 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 CAB39Q9Y376 341 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 KPTNQ9Y664 436 aa17.29■□□□□ 0.36
TRAPPC9-215ENST00000524162 IGKV1D-17A0A075B6S4 117 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 H0YJX3 145 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 MT-ND2P03891 347 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 PSG2P11465 335 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 CAPGP40121 348 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 FGF12P61328 243 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 ELF3P78545 371 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 C1orf122Q6ZSJ8 110 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 PHC2Q8IXK0 858 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 KIR3DL3Q8N743 410 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 FAM216BQ8N7L0 139 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 FBLIM1Q8WUP2 373 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 SPSB1Q96BD6 273 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 WDFY2Q96P53 400 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 CNTD2Q9H8S5 307 aa17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 DIMT1Q9UNQ2 313 aaKnown RBP17.28■□□□□ 0.36
TRAPPC9-215ENST00000524162 DSCAML1Q8TD84 2053 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 PRKACBP22694 351 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 RBP2P50120 134 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 GBX2P52951 348 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 PDCD1Q15116 288 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 SMN1Q16637 294 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 CALHM1Q8IU99 346 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 RDH10Q8IZV5 341 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 OR5T2Q8NGG2 359 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 ST8SIA4Q92187 359 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 DCTN5Q9BTE1 182 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 SIRPDQ9H106 197 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 RASSF4Q9H2L5 321 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 ISG20L2Q9H9L3 353 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 ZMAT3Q9HA38 289 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 ZNF69Q9UC07 566 aa17.27■□□□□ 0.36
TRAPPC9-215ENST00000524162 TRBV23-1A0A0A0MS06 115 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 A6NIN4 97 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 SYNGR1O43759 233 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 VENTXO95231 258 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 CLIC3O95833 236 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 PIPP12273 146 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 SLC34A1Q06495 639 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 MED21Q13503 144 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 DMRTC1Q5HYR2 192 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 METTL11BQ5VVY1 283 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 METAP1DQ6UB28 335 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 TMPRSS11AQ6ZMR5 421 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 Q8IYB0 196 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 C8orf59Q8N0T1 100 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 ZNF561Q8N587 486 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 ZNF676Q8N7Q3 588 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 CNIH3Q8TBE1 160 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 RPS4Y2Q8TD47 263 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 ADAT3Q96EY9 351 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 BORCS8Q96FH0 119 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 SLC6A7Q99884 636 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 C19orf24Q9BVV8 132 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 COMMD4Q9H0A8 199 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 PRDM13Q9H4Q3 707 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 NEK6Q9HC98 313 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 SNTG1Q9NSN8 517 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 PLCXD1Q9NUJ7 323 aa17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 CNOT2Q9NZN8 540 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 SLC25A10Q9UBX3 287 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 EXOSC1Q9Y3B2 195 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-215ENST00000524162 ANKRD65E5RJM6 399 aa17.25■□□□□ 0.35
TRAPPC9-215ENST00000524162 TRIM77I1YAP6 450 aa17.25■□□□□ 0.35
TRAPPC9-215ENST00000524162 TOX4O94842 621 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms