RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SLC15A3Q8IY34 581 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF561Q8N587 486 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF676Q8N7Q3 588 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 OR52L1Q8NGH7 329 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 ABHD6Q9BV23 337 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 OR51I2Q9H344 312 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 MED20Q9H944 212 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 TBC1D23Q9NUY8 699 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 INTS9Q9NV88 658 aaKnown RBP9.26□□□□□ -0.93
SDCBP-211ENST00000523441 LINC00527Q9UJ94 153 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 LSM4Q9Y4Z0 139 aaKnown RBP9.26□□□□□ -0.93
SDCBP-211ENST00000523441 DSCAML1Q8TD84 2053 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 DNAH7Q8WXX0 4024 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 C17orf98A8MV24 154 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 IDH3BO43837 385 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 MTRF1O75570 445 aaKnown RBP9.25□□□□□ -0.93
SDCBP-211ENST00000523441 NXPH2O95156 264 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 CST4P01036 141 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 TK1P04183 234 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF728P0DKX0 622 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 IGHV1-8P0DP01 117 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 SPI1P17947 270 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 DLX6P56179 175 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 RPL23AP62750 156 aaKnown RBP9.25□□□□□ -0.93
SDCBP-211ENST00000523441 GNG3P63215 75 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 SNCBQ16143 134 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 SMIM21Q3B7S5 101 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 COQ5Q5HYK3 327 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 LCN8Q6JVE9 175 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 PRSS45Q7RTY3 260 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 TPRX1Q8N7U7 411 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 AQP3Q92482 292 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 AKR1E2Q96JD6 320 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 NOL4LQ96MY1 436 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-211ENST00000523441 CDRT15Q96T59 188 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 KCTD14Q9BQ13 255 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-211ENST00000523441 RAB21Q9UL25 225 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 LRP12Q9Y561 859 aa9.25□□□□□ -0.93
SDCBP-211ENST00000523441 ZFPL1O95159 310 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 APOC1P02654 83 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 AZGP1P25311 298 aaKnown RBP9.24□□□□□ -0.93
SDCBP-211ENST00000523441 DEFB136Q30KP8 78 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF770Q6IQ21 691 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-211ENST00000523441 GDPD3Q7L5L3 318 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 OVCH2Q7RTZ1 564 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 OR2W3Q7Z3T1 314 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 OR11H6Q8NGC7 330 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 GNPDA2Q8TDQ7 276 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 THEM6Q8WUY1 208 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 MYLK2Q9H1R3 596 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 ABCB9Q9NP78 766 aa9.24□□□□□ -0.93
SDCBP-211ENST00000523441 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-211ENST00000523441 IGHV2-26A0A0B4J1V2 119 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 FAM183AA6NL82 134 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 EDF1O60869 148 aaKnown RBP9.23□□□□□ -0.93
SDCBP-211ENST00000523441 RAMP3O60896 148 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 DYNLT3P51808 116 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 FAM76BQ5HYJ3 339 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 METTL21CQ5VZV1 264 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 BAIAP2L2Q6UXY1 529 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 OSR2Q8N2R0 312 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 POC1AQ8NBT0 407 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 OR8B12Q8NGG6 310 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 OR8D4Q8NGM9 314 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 TRMT10AQ8TBZ6 339 aaKnown RBP9.23□□□□□ -0.93
SDCBP-211ENST00000523441 RNF133Q8WVZ7 376 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 C7orf34Q96L11 122 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF714Q96N38 554 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 OR8B4Q96RC9 309 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 INTS14Q96SY0 518 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 FUZQ9BT04 418 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 SAR1AQ9NR31 198 aa9.23□□□□□ -0.93
SDCBP-211ENST00000523441 ZMAT5Q9UDW3 170 aaKnown RBP9.23□□□□□ -0.93
SDCBP-211ENST00000523441 PSMD9O00233 223 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 SOX14O95416 240 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 HTR1DP28221 377 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 RRM2P31350 389 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 BRS3P32247 399 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 IFNGR2P38484 337 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 MYCNOSP40205 109 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 OPRL1P41146 370 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 MAP2K3P46734 347 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 HAAOP46952 286 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 GSSP48637 474 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 ESRRGP62508 458 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 TSPAN31Q12999 210 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 SNAPC1Q16533 368 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 CEACAM21Q3KPI0 293 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 GLYATQ6IB77 296 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 LCNL1Q6ZST4 164 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 ASRGL1Q7L266 308 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 ARPINQ7Z6K5 226 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 TRAPPC6BQ86SZ2 158 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 SBSPONQ8IVN8 264 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 RNF148Q8N7C7 305 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 OR9Q2Q8NGE9 314 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms