RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CLPSL1A2RUU4 121 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 RFPL4AA6NLU0 287 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 RFPL4AL1F8VTS6 287 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 ATP5HO75947 161 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 NDUFA7O95182 113 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 CEBPDP49716 269 aaPredicted RBP16.96■□□□□ 0.31
SDCBP-209ENST00000522243 CLVS2Q5SYC1 327 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 C17orf107Q6ZR85 190 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 ASRGL1Q7L266 308 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 CD177Q8N6Q3 437 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 YIPF7Q8N8F6 280 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 POC1AQ8NBT0 407 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 WFDC12Q8WWY7 111 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 DPAGT1Q9H3H5 408 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 ENOPH1Q9UHY7 261 aa16.96■□□□□ 0.31
SDCBP-209ENST00000522243 CAB39Q9Y376 341 aaPredicted RBP16.96■□□□□ 0.31
SDCBP-209ENST00000522243 SAC3D1A6NKF1 404 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 FBP1P09467 338 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 FCGR1AP12314 374 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 TAF9Q16594 264 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 TMEM42Q69YG0 159 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 ZNF573Q86YE8 665 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 TRMT10AQ8TBZ6 339 aaKnown RBP16.95■□□□□ 0.3
SDCBP-209ENST00000522243 NPRL2Q8WTW4 380 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 SDSLQ96GA7 329 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 RASL12Q9NYN1 266 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 ZNRD1Q9P1U0 126 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 WARS2Q9UGM6 360 aaKnown RBP16.95■□□□□ 0.3
SDCBP-209ENST00000522243 OAZ3Q9UMX2 235 aa16.95■□□□□ 0.3
SDCBP-209ENST00000522243 PQLC2LA1A4F0 135 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 MEIOCA2RUB1 952 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 H0YAE9 185 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 J3QT63 122 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 M0R1W7 72 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 DLGAP1O14490 977 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 WIPF1O43516 503 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 KRT8P05787 483 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 SAA4P35542 130 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 BLMHQ13867 455 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 TREML4Q6UXN2 200 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 OR10H4Q8NGA5 316 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 METTL8Q9H825 291 aaKnown RBP16.94■□□□□ 0.3
SDCBP-209ENST00000522243 C19orf12Q9NSK7 152 aa16.94■□□□□ 0.3
SDCBP-209ENST00000522243 A0A1W2PQL4 384 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-209ENST00000522243 CIB2O75838 187 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 PAHP00439 452 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 PGA5P0DJD9 388 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 HTR1FP30939 366 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 PRDX2P32119 198 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 SMIM21Q3B7S5 101 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 C1orf122Q6ZSJ8 110 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 ANGPTL5Q86XS5 388 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 CENPNQ96H22 339 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-209ENST00000522243 OSBPL10Q9BXB5 764 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 OR14J1Q9UGF5 321 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 RNF114Q9Y508 228 aa16.93■□□□□ 0.3
SDCBP-209ENST00000522243 BTBD17A6NE02 478 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 NXPH2O95156 264 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 OR2T7P0C7T2 308 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 ATP6V1E1P36543 226 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 UBE2E1P51965 193 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 KRTAP10-3P60369 221 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 RPL15P61313 204 aaKnown RBP16.92■□□□□ 0.3
SDCBP-209ENST00000522243 NCR3LG1Q68D85 454 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 HCP5Q6MZN7 132 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 BRICD5Q6PL45 260 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 CATSPERDQ86XM0 798 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 CALHM1Q8IU99 346 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 OR4M1Q8NGD0 313 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 OR2T27Q8NH04 317 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 LINC01006Q8NI28 216 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 C17orf50Q8WW18 174 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 EME1Q96AY2 570 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 GABARAPL3Q9BY60 117 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 POLDIP2Q9Y2S7 368 aa16.92■□□□□ 0.3
SDCBP-209ENST00000522243 TRBV23-1A0A0A0MS06 115 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 FAM230AA0A1W2PPH8 454 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 ANKRD61A6NGH8 418 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 METTL15A6NJ78 407 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 ANGPTL7O43827 346 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 CCL1P22362 96 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 GDPGP1Q6ZNW5 385 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 Q6ZSR3 168 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 Q6ZSV7 163 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 ZNF561Q8N587 486 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 OR8J1Q8NGP2 316 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 PYDC1Q8WXC3 89 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 RORBQ92753 470 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 UBE2FQ969M7 185 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 NRIP2Q9BQI9 281 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 PLEKHA1Q9HB21 404 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 VPREB3Q9UKI3 123 aa16.91■□□□□ 0.3
SDCBP-209ENST00000522243 SF3B6Q9Y3B4 125 aaKnown RBP16.91■□□□□ 0.3
SDCBP-209ENST00000522243 SLC1A7O00341 560 aa16.9■□□□□ 0.3
SDCBP-209ENST00000522243 SYT7O43581 403 aa16.9■□□□□ 0.3
SDCBP-209ENST00000522243 NOS1APO75052 506 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-209ENST00000522243 INMTO95050 263 aa16.9■□□□□ 0.3
SDCBP-209ENST00000522243 ERVFRD-1P60508 538 aa16.9■□□□□ 0.3
SDCBP-209ENST00000522243 DHRS7BQ6IAN0 325 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-209ENST00000522243 MKXQ8IYA7 352 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms