RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RNASE12Q5GAN4 147 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 DOCK11Q5JSL3 2073 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 RSBN1Q5VWQ0 802 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC18B1Q6NT16 456 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 C9orf139Q6ZV77 190 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 FCRLAQ7L513 359 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 PRSS45Q7RTY3 260 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 KRT77Q7Z794 578 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 IZUMO1Q8IYV9 350 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 ZNF676Q8N7Q3 588 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 DUSP18Q8NEJ0 188 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC26A10Q8NG04 563 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 ENKURQ8TC29 256 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 ASB17Q8WXJ9 295 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 TRIM63Q969Q1 353 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 RFT1Q96AA3 541 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 ST6GAL2Q96JF0 529 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 ABHD6Q9BV23 337 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 EMC6Q9BV81 110 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 PRDM13Q9H4Q3 707 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 MMP26Q9NRE1 261 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 RBFOX1Q9NWB1 397 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 PAQR5Q9NXK6 330 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 B3GAT1Q9P2W7 334 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 NLKQ9UBE8 527 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 OR5V1Q9UGF6 321 aa6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-227ENST00000521387 IGHV3OR16-10A0A075B7F0 116 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 FAM240BA0A1B0GVZ2 78 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 NPIPB13A6NJU9 1138 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 TMEM212A6NML5 194 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 SRRM5B3KS81 715 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 NPIPB4C9JG80 1138 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 AIPO00170 330 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 GPR171O14626 319 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 DOK2O60496 412 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ZNF254O75437 659 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 CRYBA1P05813 215 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 IGHV4-38-2P0DP08 117 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ZNF823P16415 610 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ACHEP22303 614 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ENPP1P22413 925 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 GATA3P23771 443 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 DDOSTP39656 456 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 INPP1P49441 399 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 DAP3P51398 398 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 CCR9P51686 369 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 RIDAP52758 137 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 NKX2-5P52952 324 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 CLDN12P56749 244 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 TMEM33P57088 247 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 POU3F1Q03052 451 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ROM1Q03395 351 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 PDCD1Q15116 288 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 KCNJ8Q15842 424 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 PCK2Q16822 640 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 PLA1AQ53H76 456 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 TEX30Q5JUR7 227 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 UBE2NLQ5JXB2 153 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC25A47Q6Q0C1 308 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 VHLLQ6RSH7 139 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 CATSPERDQ86XM0 798 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 LINC00346Q8IVM7 164 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ZNF679Q8IYX0 411 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 DNAAF1Q8NEP3 725 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 OR51A4Q8NGJ6 313 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 OR6F1Q8NGZ6 308 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ZNF671Q8TAW3 534 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 GPR148Q8TDV2 347 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 C11orf40Q8WZ69 217 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC7A6Q92536 515 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 SLC25A38Q96DW6 304 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 CMTM3Q96MX0 182 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 OR5B2Q96R09 309 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 COMMD4Q9H0A8 199 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 TMEM185BQ9H7F4 350 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 BCO1Q9HAY6 547 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 SERINC1Q9NRX5 453 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 NUFIP1Q9UHK0 495 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 MRPS7Q9Y2R9 242 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 ALG5Q9Y673 324 aa6.11□□□□□ -1.43
CTNNA1-227ENST00000521387 CENPBD1B2RD01 187 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CTDSPLO15194 276 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 PPIHO43447 177 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 GSTZ1O43708 216 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 UBL3O95164 117 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 IGHV3-9P01782 118 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 IGHV2-5P01817 119 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MAS1P04201 325 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CD3GP09693 182 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 TRAPPC2P0DI81 140 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 TRAPPC2BP0DI82 140 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 CALCBP10092 127 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 MAPK3P27361 379 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 HLA-DMAP28067 261 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 NTF4P34130 210 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 BTCP35070 178 aa6.1□□□□□ -1.43
CTNNA1-227ENST00000521387 SFTPDP35247 375 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms