RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ZNF488Q96MN9 340 aa16.01■□□□□ 0.15
PABPC1-215ENST00000520804 CNN2Q99439 309 aaKnown RBP16.01■□□□□ 0.15
PABPC1-215ENST00000520804 SSX3Q99909 188 aa16.01■□□□□ 0.15
PABPC1-215ENST00000520804 FAM234AQ9H0X4 552 aa16.01■□□□□ 0.15
PABPC1-215ENST00000520804 FBLN5Q9UBX5 448 aa16.01■□□□□ 0.15
PABPC1-215ENST00000520804 POMPQ9Y244 141 aa16.01■□□□□ 0.15
PABPC1-215ENST00000520804 SYNGR1O43759 233 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 PGA5P0DJD9 388 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 DAPP51397 102 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 ZNF573Q86YE8 665 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 MKXQ8IYA7 352 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 ZNF561Q8N587 486 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 OR51G2Q8NGK0 314 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 OR5K1Q8NHB7 308 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 MEGF9Q9H1U4 602 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 MOB1AQ9H8S9 216 aa16■□□□□ 0.15
PABPC1-215ENST00000520804 LOC110117498-PIK3R3F6TDL0 507 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 J3QT63 122 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 NOS1APO75052 506 aaPredicted RBP15.99■□□□□ 0.15
PABPC1-215ENST00000520804 GABRA5P31644 462 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 PRDX2P32119 198 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 HAAOP46952 286 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 RPL31P62899 125 aaKnown RBP15.99■□□□□ 0.15
PABPC1-215ENST00000520804 C2orf68Q2NKX9 166 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 CLVS2Q5SYC1 327 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 TMEM42Q69YG0 159 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 TMEM200BQ69YZ2 307 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 ZNF322Q6U7Q0 402 aaPredicted RBP15.99■□□□□ 0.15
PABPC1-215ENST00000520804 MEPCEQ7L2J0 689 aaKnown RBP15.99■□□□□ 0.15
PABPC1-215ENST00000520804 RORBQ92753 470 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 PRRG3Q9BZD7 231 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 GTF2A1LQ9UNN4 478 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 POLDIP2Q9Y2S7 368 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 R4GMQ9 66 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 V9GYS6 101 aa15.99■□□□□ 0.15
PABPC1-215ENST00000520804 PRKDCP78527 4128 aaKnown RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 A0A1W2PPH5 198 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 SLC1A7O00341 560 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 DLGAP1O14490 977 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 MAGEB4O15481 346 aaPredicted RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 CEBPDP49716 269 aaPredicted RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 CXCR4P61073 352 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 ACTR3P61158 418 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 ESRRGP62508 458 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 LY6EQ16553 131 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 AANATQ16613 207 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 LRRC75BQ2VPJ9 315 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 AADACL4Q5VUY2 407 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 BCDIN3DQ7Z5W3 292 aaKnown RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 SLC35F2Q8IXU6 374 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 ELMOD2Q8IZ81 293 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 C11orf42Q8N5U0 333 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 OR14K1Q8NGZ2 314 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 PPP1R35Q8TAP8 253 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 FAM110DQ8TAY7 271 aaPredicted RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 UTP4Q969X6 686 aaKnown RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 SLC7A6OSQ96CW6 309 aaPredicted RBP15.98■□□□□ 0.15
PABPC1-215ENST00000520804 MNTQ99583 582 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 APOL4Q9BPW4 351 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 NRIP2Q9BQI9 281 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 HEXA-AS1Q9H8Q6 139 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 ADGRL4Q9HBW9 690 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 GPR173Q9NS66 373 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 OR52A1Q9UKL2 312 aa15.98■□□□□ 0.15
PABPC1-215ENST00000520804 NOTCH1P46531 2555 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 TGP01266 2768 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 A0A1B0GTI1 187 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 PQLC2LA1A4F0 135 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 KIR2DS4P43632 304 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 EFNB1P98172 346 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 BCL2L15Q5TBC7 163 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 NXNL2Q5VZ03 156 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 CRIP3Q6Q6R5 217 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 PLEKHG7Q6ZR37 379 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 Q6ZSR3 168 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 TCEANCQ8N8B7 351 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 HES4Q9HCC6 221 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 USE1Q9NZ43 259 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-215ENST00000520804 SIGLEC9Q9Y336 463 aa15.97■□□□□ 0.15
PABPC1-215ENST00000520804 M0R129 80 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 DNAJC8O75937 253 aaPredicted RBP15.96■□□□□ 0.15
PABPC1-215ENST00000520804 NXPH2O95156 264 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 CSF1P09603 554 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 MPZP25189 248 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 PAX6P26367 422 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 EFNB2P52799 333 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 HERPUD1Q15011 391 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 SLX4IPQ5VYV7 408 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 C11orf88Q6PI97 169 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 ASRGL1Q7L266 308 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 OR4M1Q8NGD0 313 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 OR4C13Q8NGP0 309 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 OR2T27Q8NH04 317 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 RAB18Q9NP72 206 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 KRT84Q9NSB2 600 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 CLN6Q9NWW5 311 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 MRM2Q9UI43 246 aaKnown RBP15.96■□□□□ 0.15
PABPC1-215ENST00000520804 SNX5Q9Y5X3 404 aa15.96■□□□□ 0.15
PABPC1-215ENST00000520804 TET2Q6N021 2002 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms