RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 RAB40BQ12829 278 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 BAMBIQ13145 260 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 SMN1Q16637 294 aaKnown RBP11.74□□□□□ -0.53
VEGFA-221ENST00000520265 RUSC1-AS1Q66K80 236 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 CMTM4Q8IZR5 234 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 CNIH3Q8TBE1 160 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 LHX4Q969G2 390 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 UPRTQ96BW1 309 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 BORCS8Q96FH0 119 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 WDFY2Q96P53 400 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 ELL3Q9HB65 397 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-221ENST00000520265 TNFRSF19Q9NS68 423 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 RPUSD1Q9UJJ7 312 aaKnown RBP11.74□□□□□ -0.53
VEGFA-221ENST00000520265 EXOGQ9Y2C4 368 aaKnown RBP11.74□□□□□ -0.53
VEGFA-221ENST00000520265 MYRFQ9Y2G1 1151 aa11.74□□□□□ -0.53
VEGFA-221ENST00000520265 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 SLC1A7O00341 560 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 TNFRSF13BO14836 293 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-221ENST00000520265 CYB5AP00167 134 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 PPIAL4GP0DN37 164 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 GABRB1P18505 474 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 POU3F4P49335 361 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-221ENST00000520265 GBX2P52951 348 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-221ENST00000520265 GALEQ14376 348 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 DGUOKQ16854 277 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 KLHL22Q53GT1 634 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 FAM76BQ5HYJ3 339 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 TTC23Q5W5X9 447 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 TMEM42Q69YG0 159 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 ACP7Q6ZNF0 438 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 USP43Q70EL4 1123 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 FAM185AQ8N0U4 392 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 DHRSXQ8N5I4 330 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 POC1AQ8NBT0 407 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 ZNRF1Q8ND25 227 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 SETD9Q8NE22 299 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 CCDC54Q8NEL0 328 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 OR52I1Q8NGK6 324 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 ANGPTL6Q8NI99 470 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 TSEN15Q8WW01 171 aaKnown RBP11.73□□□□□ -0.53
VEGFA-221ENST00000520265 SLAMF9Q96A28 289 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 FGGYQ96C11 551 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 CHST5Q9GZS9 411 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 COMMD4Q9H0A8 199 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 CNTD2Q9H8S5 307 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
VEGFA-221ENST00000520265 NEK6Q9HC98 313 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 ERVK13-1Q9NX77 482 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 FRRS1LQ9P0K9 344 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 HHLA2Q9UM44 414 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 SOX21Q9Y651 276 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-221ENST00000520265 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
VEGFA-221ENST00000520265 RFPL4AA6NLU0 287 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 RFPL4AL1F8VTS6 287 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 J3QRE1 110 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 PSG2P11465 335 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 MYL12AP19105 171 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
VEGFA-221ENST00000520265 NANOS3P60323 173 aaKnown RBP11.72□□□□□ -0.53
VEGFA-221ENST00000520265 PRB3Q04118 309 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-221ENST00000520265 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
VEGFA-221ENST00000520265 UBE2V2Q15819 145 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 ZNF691Q5VV52 312 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 C12orf54Q6X4T0 127 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 PACRGLQ8N7B6 248 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 GATAD2BQ8WXI9 593 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 GCDHQ92947 438 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-221ENST00000520265 RFT1Q96AA3 541 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 ADAT3Q96EY9 351 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-221ENST00000520265 DNTTIP1Q9H147 329 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 C8orf4Q9NR00 106 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 SIRT7Q9NRC8 400 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 INPP5EQ9NRR6 644 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 RASL12Q9NYN1 266 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 COL6A5A8TX70 2615 aa11.72□□□□□ -0.53
VEGFA-221ENST00000520265 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 A0A1W2PRD5 423 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 A0A1W2PRF3 423 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 A0A1W2PRM7 423 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 DNAJC9-AS1A6NH13 148 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 E9PQ18 207 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 FCN3O75636 299 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 ACAA1P09110 424 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-221ENST00000520265 PGA5P0DJD9 388 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 AMY2BP19961 511 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 FUT6P51993 359 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 ATP1B3P54709 279 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 MTCP1P56278 107 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 ISL1P61371 349 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 BLMHQ13867 455 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 PDCD1Q15116 288 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 VMO1Q7Z5L0 202 aa11.71□□□□□ -0.53
VEGFA-221ENST00000520265 CALHM1Q8IU99 346 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms