RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	ARRDC5	A6NEK1	342 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	C12orf71	A8MTZ7	269 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CIB2	O75838	187 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	REN	P00797	406 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CST2	P09228	141 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	MMP7	P09237	267 aa	Predicted RBP	5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CCL2	P13500	99 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CD99	P14209	185 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	HIST1H1C	P16403	213 aa	Known RBP	5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	GNB3	P16520	340 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	MSR1	P21757	451 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CRABP1	P29762	137 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	APLNR	P35414	380 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	MNDA	P41218	407 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	ARHGDIA	P52565	204 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	SNRPD2	P62316	118 aa	Known RBP	5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CBX1	P83916	185 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	PSG4	Q00888	419 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	COX10	Q12887	443 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	SNTB2	Q13425	540 aa	Known RBP	5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	RAB35	Q15286	201 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	ODF4	Q2M2E3	257 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	PABPC1L2A	Q5JQF8	200 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	C11orf71	Q6IPW1	123 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	LEG1	Q6P5S2	330 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	DNM1P34	Q6PK57	102 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	UGT2A3	Q6UWM9	527 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	RASSF6	Q6ZTQ3	369 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	AKR7L	Q8NHP1	331 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLCO4A1	Q96BD0	722 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	SPSB1	Q96BD6	273 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	FOXN4	Q96NZ1	517 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	NMNAT3	Q96T66	252 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	LITAF	Q99732	161 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF416	Q9BWM5	594 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	TSSK6	Q9BXA6	273 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CACNG6	Q9BXT2	260 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR2H1	Q9GZK4	316 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF442	Q9H7R0	627 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228		Q9H8V8	135 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	CDH20	Q9HBT6	801 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	POLE4	Q9NR33	117 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	IL20	Q9NYY1	176 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	PDP1	Q9P0J1	537 aa	Predicted RBP	5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	DNAJB9	Q9UBS3	223 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	FREM1	Q5H8C1	2179 aa		5.76	□□□□□ -1.49
SDCBP-208	ENST00000520228	C5orf49	A4QMS7	147 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	ANKRD61	A6NGH8	418 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228		H3BN98	237 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228		H7C417	338 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	BHLHE40	O14503	412 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	GPRIN2	O60269	458 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	MPZL1	O95297	269 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	SOX14	O95416	240 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	IGFBP1	P08833	259 aa	Predicted RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF32	P17041	273 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	CCNO	P22674	350 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	STOM	P27105	288 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	GLRX	P35754	106 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	WNT5A	P41221	380 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	GDI2	P50395	445 aa	Known RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	CRIP2	P52943	208 aa	Predicted RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	RPS23	P62266	143 aa	Known RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	LSM6	P62312	80 aa	Known RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	ENDOG	Q14249	297 aa	Known RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	TAF13	Q15543	124 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	TBC1D28	Q2M2D7	210 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF876P	Q49A33	203 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	ASRGL1	Q7L266	308 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLC16A9	Q7RTY1	509 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	TMEM179B	Q7Z7N9	219 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR6V1	Q8N148	313 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	SVOPL	Q8N434	492 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	SDR9C7	Q8NEX9	313 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR2T33	Q8NG76	320 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR52E2	Q8NGJ4	325 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR8D4	Q8NGM9	314 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	HPSE2	Q8WWQ2	592 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	C11orf40	Q8WZ69	217 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	TSSK2	Q96PF2	358 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	NIPSNAP1	Q9BPW8	284 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	PLA2G12A	Q9BZM1	189 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	RPRD1B	Q9NQG5	326 aa	Known RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	ARMC1	Q9NVT9	282 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	EIF3K	Q9UBQ5	218 aa	Known RBP	5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	B9D1	Q9UPM9	204 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	BAIAP2	Q9UQB8	552 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	AP4S1	Q9Y587	144 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	CELSR1	Q9NYQ6	3014 aa		5.75	□□□□□ -1.49
SDCBP-208	ENST00000520228	PRRC2A	P48634	2157 aa	Known RBP	5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	ALPK2	Q86TB3	2170 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	F8	P00451	2351 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	IGLV1-36	A0A0B4J1U3	117 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	TRIM64	A6NGJ6	449 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	TRIM64B	A6NI03	449 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	RIIAD1	A6NNX1	92 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	DCTN6	O00399	190 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	SGCE	O43556	437 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	SNAP29	O95721	258 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	IFNG	P01579	166 aa		5.74	□□□□□ -1.49

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