RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TRAV8-4A0A0B4J246 113 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 A0A1B0GTQ1 180 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 H0YC42 278 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 J3QT63 122 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 DFFAO00273 331 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 P01737 135 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 PAX6P26367 422 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 CFHR2P36980 270 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 MTPNP58546 118 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 SPAG1Q07617 926 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 HIKESHIQ53FT3 197 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 AMMECR1LQ6DCA0 310 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 SMARCD3Q6STE5 483 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 USP50Q70EL3 339 aaPredicted RBP2.57□□□□□ -2
PTPN12-213ENST00000519553 RDH14Q9HBH5 336 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 CRLF2Q9HC73 371 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 ZBED9Q6R2W3 1325 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 WDR19Q8NEZ3 1342 aa2.57□□□□□ -2
PTPN12-213ENST00000519553 IGHV2OR16-5A0A0B4J2B6 119 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 SEC11BP0C7V7 166 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 STAG3L3P0CL85 134 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 GNRHRP30968 328 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 DAOAP59103 153 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 TNFRSF9Q07011 255 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 LDLRAD2Q5SZI1 272 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 MLIPQ5VWP3 458 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 ZNF660Q6AZW8 331 aaPredicted RBP2.56□□□□□ -2
PTPN12-213ENST00000519553 ZNF470Q6ECI4 717 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 OTUD6AQ7L8S5 288 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 TMCO2Q7Z6W1 182 aaPredicted RBP2.56□□□□□ -2
PTPN12-213ENST00000519553 OR8K3Q8NH51 312 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 AGR3Q8TD06 166 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 ITLN2Q8WWU7 325 aaPredicted RBP2.56□□□□□ -2
PTPN12-213ENST00000519553 PEX13Q92968 403 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 YIPF5Q969M3 257 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 ISG20Q96AZ6 181 aaKnown RBP2.56□□□□□ -2
PTPN12-213ENST00000519553 ZNF707Q96C28 371 aaPredicted RBP2.56□□□□□ -2
PTPN12-213ENST00000519553 INIPQ9NRY2 104 aa2.56□□□□□ -2
PTPN12-213ENST00000519553 CHTOPQ9Y3Y2 248 aaKnown RBP2.56□□□□□ -2
PTPN12-213ENST00000519553 GOLGA6L7A0A1B0GV03 622 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 ZNF701M0R085 212 aaPredicted RBP2.55□□□□□ -2
PTPN12-213ENST00000519553 CASC3O15234 703 aaKnown RBP2.55□□□□□ -2
PTPN12-213ENST00000519553 HLA-GP17693 338 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 TEAD1P28347 426 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 TRDNQ13061 729 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 MRPL2Q5T653 305 aaKnown RBP2.55□□□□□ -2
PTPN12-213ENST00000519553 LIN9Q5TKA1 542 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 MROH5Q6ZUA9 1318 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 TRMT10CQ7L0Y3 403 aaKnown RBP2.55□□□□□ -2
PTPN12-213ENST00000519553 NLRC5Q86WI3 1866 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 LINC00337Q8N6G1 96 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 ORAOV1Q8WV07 137 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 API5Q9BZZ5 524 aaKnown RBP2.55□□□□□ -2
PTPN12-213ENST00000519553 OR2S2Q9NQN1 319 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 ASF1BQ9NVP2 202 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 PSME2Q9UL46 239 aa2.55□□□□□ -2
PTPN12-213ENST00000519553 NPHP4O75161 1426 aaPredicted RBP2.54□□□□□ -2
PTPN12-213ENST00000519553 TTC41PQ6P2S7 1318 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 NCF1BA6NI72 391 aaPredicted RBP2.54□□□□□ -2
PTPN12-213ENST00000519553 NCF1CA8MVU1 366 aaPredicted RBP2.54□□□□□ -2
PTPN12-213ENST00000519553 C15orf65H3BRN8 121 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 HCCSP53701 268 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 FMODQ06828 376 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 C2orf54Q08AI8 447 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 OR2W3Q7Z3T1 314 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 ITPRIPQ8IWB1 547 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 OR52K1Q8NGK4 314 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 ING5Q8WYH8 240 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 TNFRSF14Q92956 283 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 DUSP21Q9H596 190 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 TMEM38BQ9NVV0 291 aa2.54□□□□□ -2
PTPN12-213ENST00000519553 SBNO1A3KN83 1393 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 PLEKHG2Q9H7P9 1386 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 NDUFS5O43920 106 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 OR4Q2P0C623 313 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 PSMD4P55036 377 aaKnown RBP2.53□□□□□ -2
PTPN12-213ENST00000519553 KLF3P57682 345 aaPredicted RBP2.53□□□□□ -2
PTPN12-213ENST00000519553 PDZD11Q5EBL8 140 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 VTCN1Q7Z7D3 282 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 PRNTQ86SH4 94 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 RBPMSQ93062 196 aaKnown RBP2.53□□□□□ -2
PTPN12-213ENST00000519553 RNF170Q96K19 258 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 SPACA5Q96QH8 159 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 BLZF1Q9H2G9 400 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 ARMC7Q9H6L4 198 aa2.53□□□□□ -2
PTPN12-213ENST00000519553 PEF1Q9UBV8 284 aaKnown RBP2.53□□□□□ -2
PTPN12-213ENST00000519553 TMEM94Q12767 1356 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 IGKV1OR2-108A0A075B7D4 117 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 UPK1AO00322 258 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 NEMFO60524 1076 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 CPSF4O95639 269 aaKnown RBP2.52□□□□□ -2.01
PTPN12-213ENST00000519553 RALBP11234 206 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 TUFMP49411 452 aaKnown RBP2.52□□□□□ -2.01
PTPN12-213ENST00000519553 MLF1P58340 268 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 LAMTOR4Q0VGL1 99 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 PYDC2Q56P42 97 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 CPTPQ5TA50 214 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 EPGNQ6UW88 154 aa2.52□□□□□ -2.01
PTPN12-213ENST00000519553 SLC35D2Q76EJ3 337 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms