RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HGDQ93099 445 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 TOP1MTQ969P6 601 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 SHANK2-AS3Q9BTD1 123 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 INIPQ9NRY2 104 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 TAS2R1Q9NYW7 299 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 SLC22A7Q9Y694 548 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 BRCA1P38398 1863 aaKnown RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 RPRD2Q5VT52 1461 aaKnown RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 CLDN34H7C241 214 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 COL8A2P25067 703 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 NUDT2P50583 147 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 OR12D2P58182 307 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 MLF1P58340 268 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 PRKCDQ05655 676 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 LAMTOR4Q0VGL1 99 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 STK38Q15208 465 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 TAF9Q16594 264 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 TTC32Q5I0X7 151 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 PDPNQ86YL7 162 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 LRRC8AQ8IWT6 810 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 ARHGAP18Q8N392 663 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 ZNF664Q8N3J9 261 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 OR51L1Q8NGJ5 315 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 YIPF6Q96EC8 236 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 ZNF649Q9BS31 505 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 FBXO44Q9H4M3 255 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 KPTNQ9Y664 436 aa2.19□□□□□ -2.06
SQLE-202ENST00000518604 KIF27Q86VH2 1401 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 LOC100653049A0A140TA62 436 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 ANKRD20A5PA0PJZ0 165 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 C9JQL5 133 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 KRT34O76011 436 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 MBP02144 154 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 CRYGCP07315 174 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 INAFM2P0DMQ5 153 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 PAX6P26367 422 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 HTR2BP41595 481 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 RPL31P62899 125 aaKnown RBP2.18□□□□□ -2.06
SQLE-202ENST00000518604 LINC00303Q3SY05 128 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 FAM27D1Q5T7N8 215 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 DUPD1Q68J44 220 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 USP50Q70EL3 339 aaPredicted RBP2.18□□□□□ -2.06
SQLE-202ENST00000518604 OR51A7Q8NH64 312 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 FAM57AQ8TBR7 257 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 FAM131CQ96AQ9 280 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 KIAA1143Q96AT1 154 aaPredicted RBP2.18□□□□□ -2.06
SQLE-202ENST00000518604 RNF170Q96K19 258 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 TM2D3Q9BRN9 247 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 TMED9Q9BVK6 235 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 WDR55Q9H6Y2 383 aaPredicted RBP2.18□□□□□ -2.06
SQLE-202ENST00000518604 RDH14Q9HBH5 336 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 ZNF302Q9NR11 478 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 PRO0628Q9UI54 55 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 NID2Q14112 1375 aa2.18□□□□□ -2.06
SQLE-202ENST00000518604 ELP1O95163 1332 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 MROH5Q6ZUA9 1318 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 IZUMO1RA6ND01 250 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 UPK1AO00322 258 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 ALOX12BO75342 701 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 KCNK2O95069 426 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 OTCP00480 354 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 NRASP01111 189 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 HRASP01112 189 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 KRASP01116 189 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 OR5AC1P0C628 307 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 P0C880 135 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 SPIN3Q5JUX0 258 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 BRD3OSQ6XYD6 125 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 OR8A1Q8NGG7 326 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 NT5CQ8TCD5 201 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 CENPNQ96H22 339 aaPredicted RBP2.17□□□□□ -2.06
SQLE-202ENST00000518604 DERL3Q96Q80 235 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 PEBP4Q96S96 227 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 BCL7BQ9BQE9 202 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 MRPL20Q9BYC9 149 aaKnown RBP2.17□□□□□ -2.06
SQLE-202ENST00000518604 TSGA10Q9BZW7 698 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 COA1Q9GZY4 146 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 GAL3ST2Q9H3Q3 398 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 TRIM45Q9H8W5 580 aaPredicted RBP2.17□□□□□ -2.06
SQLE-202ENST00000518604 ABCB9Q9NP78 766 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 FLVCR2Q9UPI3 526 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 ORC6Q9Y5N6 252 aa2.17□□□□□ -2.06
SQLE-202ENST00000518604 FAM240AA0A1B0GVK7 77 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 GMNCA6NCL1 334 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 SEC14L6B5MCN3 397 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 C4orf51C9J302 202 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 H0YC42 278 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 TCAPO15273 167 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 IGLV6-57P01721 117 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 RHOCP08134 193 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 ARR3P36575 388 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 BAMBIQ13145 260 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 SYT6Q5T7P8 510 aaPredicted RBP2.16□□□□□ -2.06
SQLE-202ENST00000518604 KCTD16Q68DU8 428 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 C16orf87Q6PH81 154 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 EPGNQ6UW88 154 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 FAM131AQ6UXB0 335 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 ASCL4Q6XD76 172 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 FAM231DQ6ZW35 169 aa2.16□□□□□ -2.06
SQLE-202ENST00000518604 CA13Q8N1Q1 262 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms