RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GLRA1P23415 457 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 WNT4P56705 351 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 TAS2R43P59537 309 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 WDR25Q64LD2 544 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-217ENST00000518538 STUMQ69YW2 141 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 DMKNQ6E0U4 476 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-217ENST00000518538 FAHD2BQ6P2I3 314 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-217ENST00000518538 IL17RELQ6ZVW7 336 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 NANOGP1Q8N7R0 232 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 POC1AQ8NBT0 407 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 TSEN15Q8WW01 171 aaKnown RBP18.32■□□□□ 0.52
VEGFA-217ENST00000518538 RGP1Q92546 391 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-217ENST00000518538 FAHD2AQ96GK7 314 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 CNBD2Q96M20 576 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 ERGIC3Q9Y282 383 aa18.32■□□□□ 0.52
VEGFA-217ENST00000518538 SONP18583 2426 aaKnown RBP18.32■□□□□ 0.52
VEGFA-217ENST00000518538 IGKV1-27A0A075B6S5 117 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 NOS1APO75052 506 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-217ENST00000518538 SLC35A2P78381 396 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 ANGPTL5Q86XS5 388 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 CALHM1Q8IU99 346 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 PARP16Q8N5Y8 322 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 GPR148Q8TDV2 347 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 SPSB1Q96BD6 273 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 TMIGD2Q96BF3 282 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 CDCA4Q9BXL8 241 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 MMP26Q9NRE1 261 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 PAK1IP1Q9NWT1 392 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-217ENST00000518538 RASL12Q9NYN1 266 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 NLKQ9UBE8 527 aa18.31■□□□□ 0.52
VEGFA-217ENST00000518538 TRAPPC2LH3BP13 241 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 TMPRSS2O15393 492 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 MT-ND2P03891 347 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 ACAA1P09110 424 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-217ENST00000518538 FAM157CP0CG43 387 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 PGA5P0DJD9 388 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 AZGP1P25311 298 aaKnown RBP18.3■□□□□ 0.52
VEGFA-217ENST00000518538 RBP2P50120 134 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 IL24Q13007 206 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 ATPAF1Q5TC12 328 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-217ENST00000518538 LHFPL2Q6ZUX7 228 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 SLC36A1Q7Z2H8 476 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 SERPINA12Q8IW75 414 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 OR5T2Q8NGG2 359 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 OR5D14Q8NGL3 314 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 OR13C9Q8NGT0 318 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 CCL13Q99616 98 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 ZNF184Q99676 751 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-217ENST00000518538 MND1Q9BWT6 205 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 TMPRSS13Q9BYE2 586 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 DNTTIP1Q9H147 329 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 DUSP21Q9H596 190 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 ZCCHC4Q9H5U6 513 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 SNTG1Q9NSN8 517 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 ZNF281Q9Y2X9 895 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 PCDHGB5Q9Y5G0 923 aa18.3■□□□□ 0.52
VEGFA-217ENST00000518538 OCM2P0CE71 109 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 OCMP0CE72 109 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-217ENST00000518538 ATP1B3P54709 279 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 PAX2Q02962 417 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 ACP7Q6ZNF0 438 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 ZFP41Q8N8Y5 198 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 SGCDQ92629 289 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 GHSRQ92847 366 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 ZNF488Q96MN9 340 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 OPALINQ96PE5 141 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 NRIP2Q9BQI9 281 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 NEK6Q9HC98 313 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 SMURF1Q9HCE7 757 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 INSIG2Q9Y5U4 225 aa18.29■□□□□ 0.52
VEGFA-217ENST00000518538 NF1P21359 2839 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 SETD2Q9BYW2 2564 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-217ENST00000518538 NKX6-3A6NJ46 265 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 OR2AT4A6NND4 320 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 DVL1O14640 695 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 ALX3O95076 343 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 CD2P06729 351 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 SRD5A1P18405 259 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 AMY2BP19961 511 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 CRHBPP24387 322 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 SOX2P48431 317 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 BDH1Q02338 343 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 SMIM21Q3B7S5 101 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 TEX29Q8N6K0 151 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 ANGPTL6Q8NI99 470 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 DACT3Q96B18 629 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-217ENST00000518538 PGLYRP3Q96LB9 341 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 C7orf69Q9H7B7 122 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 HES4Q9HCC6 221 aa18.28■□□□□ 0.52
VEGFA-217ENST00000518538 LOC105371242A0A075B767 164 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 IGHV2-70DA0A0C4DH43 119 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 SULT1B1O43704 296 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 NXPH2O95156 264 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 AVPP01185 164 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 MTCP1P56278 107 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 ERVK11-1P61568 191 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 ACSM1Q08AH1 577 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 IRF3Q14653 427 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 C11orf91Q3C1V1 193 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 YIF1BQ5BJH7 314 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms