RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TMCC3Q9ULS5 477 aa2.54□□□□□ -2
SCARNA13-201ENST00000516672 STUB1Q9UNE7 303 aa2.54□□□□□ -2
SCARNA13-201ENST00000516672 POFUT2Q9Y2G5 429 aa2.54□□□□□ -2
SCARNA13-201ENST00000516672 NOSIPQ9Y314 301 aaKnown RBP2.54□□□□□ -2
SCARNA13-201ENST00000516672 FLVCR1Q9Y5Y0 555 aa2.54□□□□□ -2
SCARNA13-201ENST00000516672 ARPC4-TTLL3A0A0A6YYG9 625 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 LINC00854A0A1B0GVQ3 168 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CIB4A0PJX0 185 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SHISA3A0PJX4 238 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR5H1A6NKK0 313 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SNTNA6NMZ2 147 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF726A6NNF4 738 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF587BE7ETH6 402 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TNFRSF11BO00300 401 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MYL12BO14950 172 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RNF13O43567 381 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NOS1APO75052 506 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 ENTPD6O75354 484 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MTRF1O75570 445 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 LYZL6O75951 148 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CDRT1O95170 752 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NDUFB2O95178 105 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CH25HO95992 272 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 WNT11O96014 354 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CFDP00746 253 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 IGHG1P01857 330 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 IGHMP01871 453 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CD14P08571 375 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MT1HL1P0DM35 61 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 IGHV4-30-4P0DP06 118 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RRASP10301 218 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 IFI30P13284 250 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ANXA8P13928 327 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ARSBP15848 533 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CPEP16870 476 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MYL12AP19105 171 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TNFRSF1BP20333 461 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NPR2P20594 1047 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MAKP20794 623 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TUBG1P23258 451 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 PTBP1P26599 531 aaKnown RBP eCLIP2.53□□□□□ -28e-66■■■■□ 22.1
SCARNA13-201ENST00000516672 GRPRP30550 384 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SOX6P35712 828 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 GUCA1AP43080 201 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 OMPP47874 163 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CENPAP49450 140 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RNF144AP50876 292 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 BPIFB3P59826 476 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 KRTAP10-2P60368 255 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RPL27P61353 136 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 B2MP61769 119 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 RPS25P62851 125 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 DHODHQ02127 395 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TSPAN31Q12999 210 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MLLT11Q13015 90 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 MAB21L1Q13394 359 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TPBGQ13641 420 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 FHL1Q13642 323 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 GPR176Q14439 515 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SEC23BQ15437 767 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MICAQ29983 383 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TIMM50Q3ZCQ8 353 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ALG10Q5BKT4 473 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 THEM4Q5T1C6 240 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MEDAGQ5VYS4 303 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 FAM122CQ6P4D5 195 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ANKRD16Q6P6B7 361 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CNIH2Q6PI25 160 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 CD200R1LQ6Q8B3 271 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SMARCD3Q6STE5 483 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TEX261Q6UWH6 196 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ETV3LQ6ZN32 361 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 DPY19L2P2Q6ZN68 376 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SLC35D2Q76EJ3 337 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NUFIP2Q7Z417 695 aaKnown RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZER1Q7Z7L7 766 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SYT9Q86SS6 491 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 COMMD7Q86VX2 200 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NKAIN4Q8IVV8 208 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 NRMQ8IXM6 262 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 C20orf196Q8IYI0 205 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TMEM123Q8N131 208 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MUC20Q8N307 709 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 STX19Q8N4C7 294 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 C10orf53Q8N6V4 93 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF433Q8N7K0 673 aaPredicted RBP2.53□□□□□ -2
SCARNA13-201ENST00000516672 NANOGP1Q8N7R0 232 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 DTX3Q8N9I9 347 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF680Q8NEM1 530 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR11H7Q8NGC8 314 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR4K5Q8NGD3 323 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR9Q2Q8NGE9 314 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR4C13Q8NGP0 309 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 OR10Z1Q8NGY1 313 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 ZNF417Q8TAU3 575 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 GNPDA2Q8TDQ7 276 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 TMEM54Q969K7 222 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 SLC25A36Q96CQ1 311 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MS4A3Q96HJ5 214 aa2.53□□□□□ -2
SCARNA13-201ENST00000516672 MOGAT1Q96PD6 335 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms