RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 A0A0B4J2E0 115 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 A0A0J9YXY3 114 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 C1orf232A0A0U1RR37 186 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 GOLGA8JA6NMD2 632 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 KRTAP4-16G5E9R7 235 aaPredicted RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 GOLGA8RI6L899 631 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 PEX7O00628 323 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TOR1AO14656 332 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 CCL16O15467 120 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 PGA5P0DJD9 388 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TDGF1P13385 188 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 KCNE1P15382 129 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 CSRP1P21291 193 aaKnown RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 GABRR1P24046 479 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 MYL9P24844 172 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 GNRHRP30968 328 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 BTCP35070 178 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 UGT2B10P36537 528 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 PPICP45877 212 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 RAB7AP51149 207 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TDGF1P3P51864 188 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 RND2P52198 227 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 APOC4P55056 127 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 DIO3P55073 304 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 VSX2P58304 361 aaPredicted RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 PAFAH1B2P68402 229 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 PRR3P79522 188 aaKnown RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 C2orf54Q08AI8 447 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 C2orf80Q0P641 193 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 PDGFRLQ15198 375 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 ZBTB6Q15916 424 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 ACTL10Q5JWF8 245 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 C12orf54Q6X4T0 127 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 RNF165Q6ZSG1 346 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 SSX7Q7RTT5 188 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 NKAIN4Q8IVV8 208 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TMEM61Q8N0U2 210 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 DAW1Q8N136 415 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 NPWQ8N729 165 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 DNAAF3Q8N9W5 541 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 MDS2Q8NDY4 140 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 ZNF738Q8NE65 137 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 OR10W1Q8NGF6 305 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 OR4S2Q8NH73 311 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 MCOLN3Q8TDD5 553 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 DOK4Q8TEW6 326 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 ZFP90Q8TF47 636 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TMEM234Q8WY98 164 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 RORBQ92753 470 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 SGTBQ96EQ0 304 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 AURKBQ96GD4 344 aaPredicted RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 CTRCQ99895 268 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 ZNF251Q9BRH9 671 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 SRRQ9GZT4 340 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 PLEKHA1Q9HB21 404 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 HEBP1Q9NRV9 189 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 NKIRAS1Q9NYS0 192 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 RBAKQ9NYW8 714 aaPredicted RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 NDRG2Q9UN36 371 aaKnown RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 PSMD13Q9UNM6 376 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 KLF12Q9Y4X4 402 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 TSSC4Q9Y5U2 329 aaPredicted RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 URGCP-MRPS24S4R325 110 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 ATAD5Q96QE3 1844 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 NID2Q14112 1375 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 RAI1Q7Z5J4 1906 aaPredicted RBP2.18□□□□□ -2.06
HERC4-215ENST00000515753 MYH13Q9UKX3 1938 aa2.18□□□□□ -2.06
HERC4-215ENST00000515753 FOCADQ5VW36 1801 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 COL6A3P12111 3177 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 MYH1P12882 1939 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 DOCK3Q8IZD9 2030 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 IGLV1-36A0A0B4J1U3 117 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 WI2-2373I1.2A0A1W2PRP0 233 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 MYBPHLA2RUH7 354 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 TVP23AA6NH52 213 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 ZFP92A6NM28 416 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 SYCE1LA8MT33 242 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CLDN34H7C241 214 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 K7EN84 100 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 hCG_2039718K7EN88 272 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 LAD1O00515 517 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 SNAI2O43623 268 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 KLHL2O95198 593 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 TTC4O95801 387 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 HSPB1P04792 205 aaKnown RBP2.17□□□□□ -2.06
HERC4-215ENST00000515753 OR5AL1P0C617 328 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 ZDHHC11BP0C7U3 371 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 SLC35E2BP0CK96 405 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 PGA4P0DJD7 388 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 PGA3P0DJD8 388 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CD37P11049 281 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 ERGP11308 486 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CD1EP15812 388 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 GABRG2P18507 467 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 SYT1P21579 422 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 CD40LGP29965 261 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 KDELR2P33947 212 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 MLF1P58340 268 aa2.17□□□□□ -2.06
HERC4-215ENST00000515753 RPL10AP62906 217 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms