RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-221	ENST00000515056	CLRN1	P58418	232 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	QRFP	P83859	136 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	AKR1C1	Q04828	323 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	C4orf46	Q504U0	113 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	C11orf87	Q6NUJ2	197 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	SLC25A47	Q6Q0C1	308 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	FADS6	Q8N9I5	356 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	ZNF565	Q8N9K5	539 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	OR10S1	Q8NGN2	331 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	RELT	Q969Z4	430 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	NTNG2	Q96CW9	530 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	OXGR1	Q96P68	337 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	EMC6	Q9BV81	110 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	POFUT1	Q9H488	388 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	CNTD2	Q9H8S5	307 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	DEPP	Q9NTK1	212 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	TUBD1	Q9UJT1	453 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	HDGFL3	Q9Y3E1	203 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	TLN1	Q9Y490	2541 aa	Known RBP	12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	ZNF878	C9JN71	531 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	TXNL1	O43396	289 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	LMX1B	O60663	402 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	AMY2A	P04746	511 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	RNF224	P0DH78	156 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	HTR5A	P47898	357 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	INPP5J	Q15735	1006 aa	Predicted RBP	12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	ZNF766	Q5HY98	468 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	LPCAT3	Q6P1A2	487 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	STOML3	Q8TAV4	291 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	HIST1H2BA	Q96A08	127 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	CHST6	Q9GZX3	395 aa		12.84	□□□□□ -0.35
APBB3-221	ENST00000515056	RCC2	Q9P258	522 aa	Known RBP	12.84	□□□□□ -0.35
APBB3-221	ENST00000515056		A0A1B0GTI1	187 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	C9orf170	A2RU37	121 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	GPR37	O15354	613 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	TRAF3IP2	O43734	574 aa	Predicted RBP	12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	F12	P00748	615 aa	Predicted RBP	12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	UBE2M	P61081	183 aa	Known RBP	12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	SRSF3	P84103	164 aa	Known RBP	12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	HIST3H3	Q16695	136 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	MOGAT2	Q3SYC2	334 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	GALNTL5	Q7Z4T8	443 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	ZNF584	Q8IVC4	421 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	SULF2	Q8IWU5	870 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	BPIFB2	Q8N4F0	458 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	OR4A4P	Q8NGN8	299 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	OR1J2	Q8NGS2	313 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	OR2AJ1	Q8NGZ0	328 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	PRRT1	Q99946	306 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	PTGES2	Q9H7Z7	377 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	TREM1	Q9NP99	234 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	LHX6	Q9UPM6	363 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	LHFPL6	Q9Y693	200 aa		12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	SPEN	Q96T58	3664 aa	Known RBP	12.83	□□□□□ -0.36
APBB3-221	ENST00000515056	TRAV17	A0A0B4J275	112 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	OR5H14	A6NHG9	310 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	SHISA8	B8ZZ34	492 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	EIF1AY	O14602	144 aa	Known RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	NME2P1	O60361	137 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	MT-ND4L	P03901	98 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	OR8U8	P0C7N1	319 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	NME2	P22392	152 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	PJVK	Q0ZLH3	352 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	PLEKHN1	Q494U1	663 aa	Predicted RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056		Q6ZS92	163 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	CPNE4	Q96A23	557 aa	Predicted RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	ZBTB8A	Q96BR9	441 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	ADAT3	Q96EY9	351 aa	Predicted RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	NKX3-1	Q99801	234 aa	Predicted RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	ATRX	P46100	2492 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056		A0A087WZY1	265 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056		A0A0G2JMM0	328 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056		A0A1W2PPB8	328 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056		A0A1W2PRS3	328 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	KIR3DP1	A8MWS1	328 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	KLRC4-KLRK1	H3BQV0	150 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	NR2C1	P13056	603 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	TBP	P20226	339 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	GNAL	P38405	381 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	PPT1	P50897	306 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	ATPAF1	Q5TC12	328 aa	Predicted RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	OR10K2	Q6IF99	312 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	ZDHHC22	Q8N966	263 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	TMEM178A	Q8NBL3	297 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	OR52N4	Q8NGI2	321 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	NRIP2	Q9BQI9	281 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	GGACT	Q9BVM4	153 aa		12.82	□□□□□ -0.36
APBB3-221	ENST00000515056	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.82	□□□□□ -0.36
APBB3-221	ENST00000515056		A0A1B0GWJ7	208 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056		A0A1W2PPE3	182 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056	PINLYP	A6NC86	204 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056	TMEM14DP	A8MWL7	114 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056		F8VVB4	439 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056		F8VWA3	439 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056		M0QYG6	137 aa		12.81	□□□□□ -0.36
APBB3-221	ENST00000515056	PPIH	O43447	177 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms