RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 EXOGQ9Y2C4 368 aaKnown RBP11.9□□□□□ -0.5
TCOF1-214ENST00000515035 LSM2Q9Y333 95 aaKnown RBP11.9□□□□□ -0.5
TCOF1-214ENST00000515035 HPP00738 406 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 ARR3P36575 388 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 IL13RA2Q14627 380 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-214ENST00000515035 ADPRHL1Q8NDY3 354 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-214ENST00000515035 LRFN3Q9BTN0 628 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 IL21Q9HBE4 155 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 TMEM30AQ9NV96 361 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 ADAP1O75689 374 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 HMGA2P52926 109 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 BTNL3Q6UXE8 466 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 GALMQ96C23 342 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 OR51B4Q9Y5P0 310 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 LIPGQ9Y5X9 500 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 LAMB1P07942 1786 aa11.9□□□□□ -0.5
TCOF1-214ENST00000515035 PRRT4C9JH25 899 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 IGLV3-27P01718 113 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 GNG4P50150 75 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 SULT1A1P50225 295 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 SLC25A1P53007 311 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 B2MP61769 119 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 STUMQ69YW2 141 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 PIK3IP1Q96FE7 263 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 ZC3HAV1LQ96H79 300 aaKnown RBP11.9□□□□□ -0.51
TCOF1-214ENST00000515035 VN1R1Q9GZP7 353 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 IL17BQ9UHF5 180 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 OPN4Q9UHM6 478 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 AMDHD2Q9Y303 409 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 KNTC1P50748 2209 aa11.9□□□□□ -0.51
TCOF1-214ENST00000515035 PNLIPRP2P54317 469 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 WNT3P56703 355 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 PKIAP61925 76 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 FZD2Q14332 565 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 MRGPRX4Q96LA9 322 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 SLC25A22Q9H936 323 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 C20orf141Q9NUB4 165 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 RPLP1P05386 114 aaKnown RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 B4GALT1P15291 398 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 RAB7AP51149 207 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 CLDN15P56746 228 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 LYPD8Q6UX82 237 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 NEIL1Q96FI4 390 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 NUP205Q92621 2012 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 H0Y8X5 98 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 ZNF207O43670 478 aaKnown RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 IGF2P01344 180 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 FGF8P55075 233 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 TP53I13Q8NBR0 393 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 OR11H7Q8NGC8 314 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 BCL2L2Q92843 193 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 TWSG1Q9GZX9 223 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 RAB33BQ9H082 229 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 FKBP11Q9NYL4 201 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 A0A1B0GX12 115 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 CXCL13O43927 109 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 HPXP02790 462 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 ELOVL1Q9BW60 279 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 WDR61Q9GZS3 305 aaKnown RBP11.89□□□□□ -0.51
TCOF1-214ENST00000515035 NAA60Q9H7X0 242 aa11.89□□□□□ -0.51
TCOF1-214ENST00000515035 C2CD4DB7Z1M9 353 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 PPM1DO15297 605 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 CDAP32320 146 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 SULT1A2P50226 295 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 DUSP2Q05923 314 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 LRP11Q86VZ4 500 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 FBXL6Q8N531 539 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 KTI12Q96EK9 354 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-214ENST00000515035 FOXQ1Q9C009 403 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 NAT8Q9UHE5 227 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 A0A0A6YYD5 115 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 PLA2G10O15496 165 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 CRHP06850 196 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
TCOF1-214ENST00000515035 KIAA0040Q15053 153 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 ELOBQ15370 118 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 KISS1Q15726 138 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM97Q5BJF2 176 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 TRILQ7L0X0 811 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 OR10A7Q8NGE5 316 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM230Q96A57 120 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 BOD1Q96IK1 185 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 TMPRSS13Q9BYE2 586 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 NUP214P35658 2090 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-214ENST00000515035 ZNF253O75346 499 aa11.88□□□□□ -0.51
TCOF1-214ENST00000515035 CDC34P49427 236 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-214ENST00000515035 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms