RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 GNPNAT1Q96EK6 184 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-213ENST00000514442 PRRX2Q99811 253 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 PBOV1Q9GZY1 135 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 FAM234AQ9H0X4 552 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 ESRP2Q9H6T0 727 aaKnown RBP11.71□□□□□ -0.53
TCOF1-213ENST00000514442 GNG13Q9P2W3 67 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 SHISA3A0PJX4 238 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 XKRY2A2RUG3 117 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 HS3ST1O14792 307 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 SFT2D2O95562 160 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 IGHV4-34P06331 123 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 UBE2V2Q15819 145 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 ZNF385CQ66K41 422 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-213ENST00000514442 BAGE3Q86Y29 109 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 BAGE2Q86Y30 109 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 SDSLQ96GA7 329 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 IP6K3Q96PC2 410 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-213ENST00000514442 ABHD6Q9BV23 337 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.53
TCOF1-213ENST00000514442 CEBPZOSA8MTT3 80 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 A8MXE2 369 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 CLDN34H7C241 214 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 CDC42EP2O14613 210 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.54
TCOF1-213ENST00000514442 TUSC2O75896 110 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 NXPH3O95157 252 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 EDDM3BP56851 147 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 TMPRSS11FQ6ZWK6 438 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 TGIF2LXQ8IUE1 241 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 LGI3Q8N145 548 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 ANKRD9Q96BM1 317 aaPredicted RBP11.71□□□□□ -0.54
TCOF1-213ENST00000514442 IL17BQ9UHF5 180 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 NEUROG3Q9Y4Z2 214 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 RGPD3A6NKT7 1758 aaPredicted RBP11.71□□□□□ -0.54
TCOF1-213ENST00000514442 FAM157BP0CG42 384 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 OR8G1Q15617 311 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 OR8B8Q15620 311 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 PHLDA2Q53GA4 152 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 ZPBPQ9BS86 351 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 AMDHD2Q9Y303 409 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 R4GMQ9 66 aa11.71□□□□□ -0.54
TCOF1-213ENST00000514442 ADRA2AP08913 450 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 SRPXP78539 464 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 IL11RAQ14626 422 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 OR1C1Q15619 314 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 ZNF528Q3MIS6 628 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 TMEM217Q8N7C4 229 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 ZNF321PQ8N8H1 164 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 ZCCHC4Q9H5U6 513 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 SCN10AQ9Y5Y9 1956 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
TCOF1-213ENST00000514442 FOXC1Q12948 553 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 OR11L1Q8NGX0 322 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 HSBP1L1C9JCN9 74 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 UBE2CO00762 179 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 DHHO43323 396 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 FOXL2P58012 376 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 NGBQ9NPG2 151 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 CCL4P13236 92 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 HNF1AP20823 631 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 DSCR4P56555 118 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-213ENST00000514442 HNF4GQ14541 408 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 OR2V1Q8NHB1 315 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 FBXL17Q9UF56 701 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 ST6GALNAC2Q9UJ37 374 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 TP53TG5Q9Y2B4 290 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 HDGFL3Q9Y3E1 203 aa11.7□□□□□ -0.54
TCOF1-213ENST00000514442 MIA3Q5JRA6 1907 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 FAM221AA4D161 298 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 SUMO3P55854 103 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-213ENST00000514442 DRAM2Q6UX65 266 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 C11orf40Q8WZ69 217 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 SIRT7Q9NRC8 400 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 ZNF121P58317 390 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-213ENST00000514442 IL10RAQ13651 578 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 ZNF66Q6ZN08 573 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 OR56B2PQ8NGI1 322 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 OR51F2Q8NH61 342 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 MYOTQ9UBF9 498 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 SPAG17Q6Q759 2223 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 C20orf202A1L168 122 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 SERPINA7P05543 415 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 TSEN54Q7Z6J9 526 aaKnown RBP11.69□□□□□ -0.54
TCOF1-213ENST00000514442 KDF1Q8NAX2 398 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-213ENST00000514442 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 OR51I2Q9H344 312 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 WSB1Q9Y6I7 421 aa11.69□□□□□ -0.54
TCOF1-213ENST00000514442 PHF1O43189 567 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms