RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KCNK7Q9Y2U2 307 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 FAM215AQ9Y5M1 114 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 A0A1W2PP11 408 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 FAM230AA0A1W2PPH8 454 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 ANKRD30BLA7E2S9 258 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 ZNF850A8MQ14 1090 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 DISC1C4P0D8 188 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 H3BUI4 141 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SMPD2O60906 423 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 RAD51DO75771 328 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 TOXO94900 526 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 IL2RAP01589 272 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 CSTBP04080 98 aaKnown RBP7.2□□□□□ -1.26
RNF4-220ENST00000513578 SULT1A3P0DMM9 295 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SULT1A4P0DMN0 295 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 RAC2P15153 192 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 GNB3P16520 340 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SELEP16581 610 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SERPINA2P20848 420 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 CCNOP22674 350 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 GNG2P59768 71 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 PRDX4Q13162 271 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 RSU1Q15404 277 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 VAX1Q5SQQ9 334 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SEZ6L2Q6UXD5 910 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 GLDNQ6ZMI3 551 aaPredicted RBP7.2□□□□□ -1.26
RNF4-220ENST00000513578 ZNF782Q6ZMW2 699 aaPredicted RBP7.2□□□□□ -1.26
RNF4-220ENST00000513578 RFPL4BQ6ZWI9 263 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SLC36A1Q7Z2H8 476 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 TRAPPC6BQ86SZ2 158 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 HOGA1Q86XE5 327 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 ZNF610Q8N9Z0 462 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 Q8NA96 180 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 NPRL2Q8WTW4 380 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 CMBLQ96DG6 245 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 ARHGAP5-AS1Q96IT6 56 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 RNF170Q96K19 258 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 PRRT1Q99946 306 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 USB1Q9BQ65 265 aaKnown RBP7.2□□□□□ -1.26
RNF4-220ENST00000513578 SFXN3Q9BWM7 321 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 PECRQ9BY49 303 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 MED28Q9H204 178 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 TP63Q9H3D4 680 aaPredicted RBP7.2□□□□□ -1.26
RNF4-220ENST00000513578 POFUT1Q9H488 388 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 CDH20Q9HBT6 801 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 GPN1Q9HCN4 374 aaPredicted RBP7.2□□□□□ -1.26
RNF4-220ENST00000513578 ING3Q9NXR8 418 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 SCP2D1Q9UJQ7 156 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 PLEKHA6Q9Y2H5 1048 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 ZNF835Q9Y2P0 537 aa7.2□□□□□ -1.26
RNF4-220ENST00000513578 FRYQ5TBA9 3013 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ESPL1Q14674 2120 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 URB1O60287 2271 aaKnown RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 IGKV1-12A0A0C4DH73 117 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OR5H1A6NKK0 313 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 CEACAM18A8MTB9 384 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 IQCF6A8MYZ5 107 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ARPC1BO15143 372 aaKnown RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 LYZL6O75951 148 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 HTR3BO95264 441 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 IGKV1D-12P01611 117 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 CCL2P13500 99 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ZNF35P13682 527 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 BLVRBP30043 206 aaPredicted RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 HOXC12P31275 282 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 PER3P56645 1201 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 MAB21L1Q13394 359 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 CDK10Q15131 360 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 RNASE10Q5GAN6 216 aaKnown RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 BHLHA15Q7RTS1 189 aaPredicted RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 MKXQ8IYA7 352 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 BPIFB2Q8N4F0 458 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ARRDC1Q8N5I2 433 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 SPICQ8N5J4 248 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ZDHHC22Q8N966 263 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OR4D10Q8NGI6 311 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OR51S1Q8NGJ8 323 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OR5D18Q8NGL1 313 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 GIMAP1Q8WWP7 306 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 HPSE2Q8WWQ2 592 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OR5P3Q8WZ94 311 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 HIST1H2AAQ96QV6 131 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 GINS4Q9BRT9 223 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 PKIBQ9C010 78 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 TINAGL1Q9GZM7 467 aaPredicted RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 CHST6Q9GZX3 395 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 OR10A4Q9H209 315 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 PIGMQ9H3S5 423 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ZMAT3Q9HA38 289 aaKnown RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 IFT46Q9NQC8 304 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 GPR160Q9UJ42 338 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ELF5Q9UKW6 265 aaPredicted RBP7.19□□□□□ -1.26
RNF4-220ENST00000513578 EDARQ9UNE0 448 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 NPTNQ9Y639 398 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ABCA12Q86UK0 2595 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 APC2O95996 2303 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 CEP295Q9C0D2 2601 aa7.19□□□□□ -1.26
RNF4-220ENST00000513578 ACACAQ13085 2346 aa7.18□□□□□ -1.26
RNF4-220ENST00000513578 MEIKINA0A087WXM9 373 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms