RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RNF170Q96K19 258 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 Q96MT0 163 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 CALN1Q9BXU9 219 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 GABARAPL1Q9H0R8 117 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 KIR3DX1Q9H7L2 352 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 ABCB9Q9NP78 766 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 NAGKQ9UJ70 344 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 ARHGAP32A7KAX9 2087 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 SLIT2O94813 1529 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 MACF1Q9UPN3 7388 aaKnown RBP0.22□□□□□ -2.37
PDGFC-208ENST00000512711 HEATR9A2RTY3 570 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 ERICH4A6NGS2 130 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 SIGLEC16A6NMB1 481 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 GOLGA8JA6NMD2 632 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 LEUTXA8MZ59 168 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 H3BMM0 161 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 MYL12BO14950 172 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 HUS1O60921 280 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 PTHP01270 115 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 GOLGA8HP0CJ92 632 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 GZMBP10144 247 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 GZMAP12544 262 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 MLNP12872 115 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 HLA-GP17693 338 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 RAB5AP20339 215 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 EMP2P54851 167 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 AP1S2P56377 157 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 ACTR3P61158 418 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 MERTKQ12866 999 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 TFDP2Q14188 446 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 ITIH4Q14624 930 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 TAF7Q15545 349 aaPredicted RBP0.22□□□□□ -2.37
PDGFC-208ENST00000512711 LINC00303Q3SY05 128 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 TMEM176BQ3YBM2 270 aaPredicted RBP0.22□□□□□ -2.37
PDGFC-208ENST00000512711 PRAMEF20Q5VT98 475 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 SLC25A25Q6KCM7 469 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 NOXRED1Q6NXP6 359 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 CASC1Q6TDU7 716 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 SPESP1Q6UW49 350 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 OTUD6AQ7L8S5 288 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 FAM228AQ86W67 206 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 SLC22A9Q8IVM8 553 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 VKORC1L1Q8N0U8 176 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 BPIFB6Q8NFQ5 453 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 OR2K2Q8NGT1 345 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 OR5H2Q8NGV7 314 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 OR51F2Q8NH61 342 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 MFSD8Q8NHS3 518 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 C2orf15Q8WU43 125 aaKnown RBP0.22□□□□□ -2.37
PDGFC-208ENST00000512711 UBE2WQ96B02 151 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 SCGB3A2Q96PL1 93 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 CRACR2AQ9BSW2 395 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 THTPAQ9BU02 230 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 C20orf24Q9BUV8 137 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 UCK2Q9BZX2 261 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 TXNIPQ9H3M7 391 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 FAM206AQ9NX38 181 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 SLC7A11Q9UPY5 501 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 U3KQK5 164 aa0.22□□□□□ -2.37
PDGFC-208ENST00000512711 TRPM3Q9HCF6 1732 aaPredicted RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 NYNRINQ9P2P1 1898 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TRAV8-6A0A0B4J262 113 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TRBV11-1A0A0K0K1C0 115 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 FNDC10F2Z333 226 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 F5H5T6 163 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 KLRC4-KLRK1H3BQV0 150 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 H3BRN7 92 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TP53I11O14683 189 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 POP7O75817 140 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TDP2O95551 362 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 PTTG1O95997 202 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 FTH1P02794 183 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 OPN1SWP03999 348 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 PTMAP06454 111 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 KRT16P08779 473 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 PTHLHP12272 177 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 UQCRFS1P47985 274 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 MRPL19P49406 292 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 SLC18A1P54219 525 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 OR2B8PP59922 312 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TRDNQ13061 729 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ELOCQ15369 112 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 BCL2A1Q16548 175 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TMEM241Q24JQ0 296 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ALKBH6Q3KRA9 238 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 HSDL1Q3SXM5 330 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 FBXL19-AS1Q494R0 122 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ANKDD1AQ495B1 522 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 PYCR3Q53H96 274 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TTMPQ5BVD1 217 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 THOC7Q6I9Y2 204 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 RWDD4Q6NW29 188 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 CLEC18BQ6UXF7 455 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 WDR82Q6UXN9 313 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF767PQ75MW2 155 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 UNC93AQ86WB7 457 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 C2orf73Q8N5S3 287 aaPredicted RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 CYB561A3Q8NBI2 242 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF738Q8NE65 137 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms