RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 PIGPP57054 158 aa8.1□□□□□ -1.11
LIMCH1-215ENST00000512632 OR9K2Q8NGE7 335 aa8.1□□□□□ -1.11
LIMCH1-215ENST00000512632 SSC4DQ8WTU2 575 aa8.1□□□□□ -1.11
LIMCH1-215ENST00000512632 FANCFQ9NPI8 374 aa8.1□□□□□ -1.11
LIMCH1-215ENST00000512632 SERPINE3A8MV23 424 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 M0R036 132 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 CD5P06127 495 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 PATE4P0C8F1 98 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 CCL1P22362 96 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 MIDNQ504T8 468 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 TMEM268Q5VZI3 342 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 LYZL2Q7Z4W2 148 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 GJC3Q8NFK1 279 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 NANPQ8TBE9 248 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 NAA11Q9BSU3 229 aaPredicted RBP8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 CCDC85CA6NKD9 419 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 M0R135 149 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 TAAR5O14804 337 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 DHRS3O75911 302 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 PRH1P02810 166 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 MSR1P21757 451 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 SNAI3Q3KNW1 292 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 KRBOX4Q5JUW0 171 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 SLC16A13Q7RTY0 426 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 HSD17B11Q8NBQ5 300 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 ZNF799Q96GE5 643 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 PISDQ9UG56 409 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 EDARQ9UNE0 448 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 B3GALT1Q9Y5Z6 326 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 EIF3GO75821 320 aaKnown RBP eCLIP8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 JTBO76095 146 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 RBMS3Q6XE24 437 aaKnown RBP8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 ANXA10Q9UJ72 324 aa8.09□□□□□ -1.11
LIMCH1-215ENST00000512632 S100A6P06703 90 aa8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 OR5AC1P0C628 307 aa8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 ZNF806P0C7X5 589 aa8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 ENDOGQ14249 297 aaKnown RBP8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 HABP2Q14520 560 aaPredicted RBP8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 IFT22Q9H7X7 185 aa8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 SPACA1Q9HBV2 294 aa8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 ATPIF1Q9UII2 106 aa8.09□□□□□ -1.12
LIMCH1-215ENST00000512632 VPS13AQ96RL7 3174 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 AQP7P3A6NL99 342 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 FOXI3A8MTJ6 420 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 MSTNO14793 375 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 DEDDO75618 318 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 APOC1P02654 83 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 ACKR3P25106 362 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 THBS4P35443 961 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RAB5BP61020 215 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RAET1LQ5VY80 246 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RPUSD3Q6P087 351 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 OR5L1Q8NGL2 311 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 HAS2Q92819 552 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 SPACA9Q96E40 222 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 KCNIP3Q9Y2W7 256 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 MASP2O00187 686 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 MBPP02686 304 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 ACAA1P09110 424 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RSU1Q15404 277 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 ABCA11PQ4W5N1 156 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC25A53Q5H9E4 307 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 SGK3Q96BR1 496 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 GHRLQ9UBU3 117 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 AK3Q9UIJ7 227 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 FBXO7Q9Y3I1 522 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RFNGQ9Y644 331 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 A0A1W2PPE3 182 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 A6NLC8 198 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 C1orf196B1AJZ1 125 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 NPIPA2E9PIF3 369 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 NPIPA3F8WFD2 350 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 ETV2O00321 342 aaPredicted RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 ARG1P05089 322 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 ITGA3P26006 1051 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 NOVA1P51513 510 aaKnown RBP8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 NHLH2Q02577 135 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 HIST3H3Q16695 136 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 OR11L1Q8NGX0 322 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC22A8Q8TCC7 542 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RHBDD1Q8TEB9 315 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 SPSB2Q99619 263 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 CHST5Q9GZS9 411 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 RGCCQ9H4X1 137 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 PARP11Q9NR21 331 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 CACFD1Q9UGQ2 172 aa8.08□□□□□ -1.12
LIMCH1-215ENST00000512632 IGLV3-12A0A075B6K2 115 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 C7orf77A4D0Y5 90 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC33A1O00400 549 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 DHHO43323 396 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CTSDP07339 412 aaPredicted RBP8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 CAMLGP49069 296 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 SLC35A1P78382 337 aa8.07□□□□□ -1.12
LIMCH1-215ENST00000512632 ADAM5Q6NVV9 412 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms