RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 SULT1A3P0DMM9 295 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 SULT1A4P0DMN0 295 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 MGMTP16455 207 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 ERP29P30040 261 aaKnown RBP11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 GNG2P59768 71 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 SLC22A6Q4U2R8 563 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 PLXDC2Q6UX71 529 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 GLDNQ6ZMI3 551 aaPredicted RBP11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 Q6ZT83 130 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 NOXA1Q86UR1 476 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 TRIB1Q96RU8 372 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 PRRT1Q99946 306 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 SELENOIQ9C0D9 397 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 C12orf49Q9H741 205 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 RANGRFQ9HD47 186 aaPredicted RBP11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 IFT46Q9NQC8 304 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 MYEF2Q9P2K5 600 aaKnown RBP11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 RTTNQ86VV8 2226 aa11.33□□□□□ -0.6
DEPDC1B-206ENST00000512452 A0A0A6YYD4 124 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 C5orf49A4QMS7 147 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 PRSS44E7EML9 344 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 CD83Q01151 205 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 CBX3Q13185 183 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 FCN2Q15485 313 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 KCNJ8Q15842 424 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 ACSF3Q4G176 576 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 C9orf135Q5VTT2 229 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 MRPL21Q7Z2W9 205 aaKnown RBP11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 RNF144BQ7Z419 303 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 SAXO1Q8IYX7 474 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 SPICQ8N5J4 248 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 OR51T1Q8NGJ9 327 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 CCDC107Q8WV48 283 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 ZNF486Q96H40 463 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 GAL3ST1Q99999 423 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 GINS4Q9BRT9 223 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 OR10A4Q9H209 315 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 TP63Q9H3D4 680 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 NKIRAS2Q9NYR9 191 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 ZNF407Q9C0G0 2248 aa11.32□□□□□ -0.6
DEPDC1B-206ENST00000512452 SHANK1Q9Y566 2161 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 MKRN2OSH3BPM6 223 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 K7EM74 188 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 CREBL2O60519 120 aaPredicted RBP11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 HOXD4P09016 255 aaPredicted RBP11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 TMEM225BP0DP42 221 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 ANXA3P12429 323 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 GNB3P16520 340 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 COX5AP20674 150 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 GZMKP49863 264 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 TMEM50BP56557 158 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 GK2Q14410 553 aaPredicted RBP11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 TBC1D28Q2M2D7 210 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 RNASE10Q5GAN6 216 aaKnown RBP11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 C1QTNF12Q5T7M4 302 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 ZNF626Q68DY1 528 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 MOB3CQ70IA8 216 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 C17orf78Q8N4C9 275 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 Q8NFD4 153 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 OR51S1Q8NGJ8 323 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 NPRL2Q8WTW4 380 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 RNF170Q96K19 258 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 Q96M66 194 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 ZNF75AQ96N20 296 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 TAAR6Q96RI8 345 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 BANF2Q9H503 90 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 OBP2BQ9NPH6 170 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 HSF4Q9ULV5 492 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 NPTNQ9Y639 398 aa11.31□□□□□ -0.6
DEPDC1B-206ENST00000512452 ARHGAP21Q5T5U3 1957 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 DNAJC13O75165 2243 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 MEIKINA0A087WXM9 373 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 UBE2QL1A1L167 161 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 MEIS3P1A6NDR6 274 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 MBD3L4A6NDZ8 208 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 MBD3L3A6NE82 208 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 ZNF503-AS2A6NEH8 195 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 MBD3L5A6NJ08 208 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 A8MV72 311 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 SOCS1O15524 211 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 TPD52L2O43399 206 aaKnown RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 SSNA1O43805 119 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 SSX5O60225 188 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 WDR1O75083 606 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 CSTBP04080 98 aaKnown RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 AMY2AP04746 511 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 ZNF735P0CB33 412 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 CD99P14209 185 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 IGHV1-2P23083 117 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 TUBG1P23258 451 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 PMELP40967 661 aa11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 KIR2DL2P43627 348 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 UBE2NP61088 152 aaKnown RBP11.3□□□□□ -0.6
DEPDC1B-206ENST00000512452 PDZK1IP1Q13113 114 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms