RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SPARTQ8N0X7 666 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 FGFRL1Q8N441 504 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 GCSAMQ8N6F7 178 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 CSNK2A3Q8NEV1 391 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 SEMA6DQ8NFY4 1073 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 OR1M1Q8NGA1 313 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 OR51A2Q8NGJ7 313 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 RPL3LQ92901 407 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 FGGYQ96C11 551 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 SMIM19Q96E16 107 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 HIST1H2AAQ96QV6 131 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 SLC6A7Q99884 636 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 MICU1Q9BPX6 476 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 TRIM36Q9NQ86 728 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 OPN4Q9UHM6 478 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 INSIG2Q9Y5U4 225 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 TRAV8-7A0A075B6U6 113 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 IGHV3OR16-10A0A075B7F0 116 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 TRBV2A0A0J9YWF9 115 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 PQLC2LA1A4F0 135 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 IRGMA1A4Y4 181 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 OOEPA6NGQ2 149 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 TRIM77I1YAP6 450 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 TNFRSF13BO14836 293 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 ADAM20O43506 726 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 RGS10O43665 173 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 SYNGR1O43759 233 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 SC5DO75845 299 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 VENTXO95231 258 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 LHBP01229 141 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 UBCP0CG48 685 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 SMIM18P0DKX4 95 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 MYL12AP19105 171 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 MAP2K3P46734 347 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 SOX2P48431 317 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 GPM6AP51674 278 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 GBX2P52951 348 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 GMFBP60983 142 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 RPS25P62851 125 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 EMX1Q04741 257 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 ACSM1Q08AH1 577 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 RIPPLY1Q0D2K3 151 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 CD276Q5ZPR3 534 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 RPL22L1Q6P5R6 122 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 LYPD2Q6UXB3 125 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 WDR82Q6UXN9 313 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 MOB3CQ70IA8 216 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 LYPD6Q86Y78 171 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 ZDHHC23Q8IYP9 409 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 BATF2Q8N1L9 274 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 NPRL2Q8WTW4 380 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 LRRC29Q8WV35 223 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 RAB40AQ8WXH6 277 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 GHSRQ92847 366 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF488Q96MN9 340 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 SPACA5Q96QH8 159 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 RTL8AQ9BWD3 113 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 CHST5Q9GZS9 411 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 MS4A7Q9GZW8 240 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 WDR13Q9H1Z4 485 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 OR51I2Q9H344 312 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 ACOT13Q9NPJ3 140 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF391Q9UJN7 358 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 NUP50Q9UKX7 468 aa7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 POLR3KQ9Y2Y1 108 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-213ENST00000509357 IGHV3OR15-7A0A075B7D8 119 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 TRBV5-7A0A0A0MS05 114 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 IGKV1-12A0A0C4DH73 117 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 A0A1B0GVI7 797 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 A0A1W2PPK0 400 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 SHISA3A0PJX4 238 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 TMEM212A6NML5 194 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 DHRS7CA6NNS2 312 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 A8MXK9 166 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 ZNF732B4DXR9 585 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 CDIPTO14735 213 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 MYL12BO14950 172 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 NDUFA2O43678 99 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 INMTO95050 263 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 FSTL3O95633 263 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 NRASP01111 189 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 IGKV1D-12P01611 117 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 GYPAP02724 150 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 ATP6V1B1P15313 513 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 IGFBP3P17936 291 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 CELP19835 753 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 NPY4RP50391 375 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 HILS1P60008 231 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 GABARAPL2P60520 117 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 TBCEQ15813 527 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 MICBQ29980 383 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 CEACAM21Q3KPI0 293 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 CCDC58Q4VC31 144 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 ZBTB37Q5TC79 503 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 TMEM244Q5VVB8 128 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 WDR25Q64LD2 544 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 C12orf54Q6X4T0 127 aa7.27□□□□□ -1.25
PDLIM5-213ENST00000509357 TMEM91Q6ZNR0 172 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms