RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
SMAD5-205ENST00000509297 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
SMAD5-205ENST00000509297 POLDIP2Q9Y2S7 368 aa12.55□□□□□ -0.4
SMAD5-205ENST00000509297 hCG_1809904A0A1W2PP81 198 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 A0A1W2PPE2 198 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 A0A1W2PR64 198 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 A0A1W2PRV1 198 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 TCRBV3S1A0A5B6 114 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 J3QT63 122 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 SLC1A7O00341 560 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 DLGAP1O14490 977 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 FKBP6O75344 327 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 SRSF10O75494 262 aaKnown RBP12.54□□□□□ -0.4
SMAD5-205ENST00000509297 NRASP01111 189 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 TTRP02766 147 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 FAHP16930 419 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 PRDX2P32119 198 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 EFNB2P52799 333 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 RPL31P62899 125 aaKnown RBP12.54□□□□□ -0.4
SMAD5-205ENST00000509297 CBX1P83916 185 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 FLOT2Q14254 428 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 CLVS2Q5SYC1 327 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 MOB3CQ70IA8 216 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 COMMD2Q86X83 199 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 CALHM1Q8IU99 346 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 FAM185AQ8N0U4 392 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 CD177Q8N6Q3 437 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 CNN2Q99439 309 aaKnown RBP12.54□□□□□ -0.4
SMAD5-205ENST00000509297 NRIP2Q9BQI9 281 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 PRRG3Q9BZD7 231 aa12.54□□□□□ -0.4
SMAD5-205ENST00000509297 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 RFPL4AA6NLU0 287 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 RFPL4AL1F8VTS6 287 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 PSMD9O00233 223 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 MRPL3P09001 348 aaKnown RBP12.53□□□□□ -0.4
SMAD5-205ENST00000509297 CSF1P09603 554 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 MPZP25189 248 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 CAPZA1P52907 286 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 ACTR3P61158 418 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 ESRRGP62508 458 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 EFNB1P98172 346 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 HERPUD1Q15011 391 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
SMAD5-205ENST00000509297 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 SPATA24Q86W54 205 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 ELMOD2Q8IZ81 293 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 CFHR4Q92496 578 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 HES4Q9HCC6 221 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 COPS3Q9UNS2 423 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 V9GYS6 101 aa12.53□□□□□ -0.4
SMAD5-205ENST00000509297 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 SYNGR1O43759 233 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 HAAOP46952 286 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 MFGE8Q08431 387 aaPredicted RBP12.52□□□□□ -0.41
SMAD5-205ENST00000509297 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
SMAD5-205ENST00000509297 Q6ZTK2 550 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 MEPCEQ7L2J0 689 aaKnown RBP12.52□□□□□ -0.41
SMAD5-205ENST00000509297 UTP4Q969X6 686 aaKnown RBP12.52□□□□□ -0.41
SMAD5-205ENST00000509297 CDCA4Q9BXL8 241 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMAD5-205ENST00000509297 R4GMQ9 66 aa12.52□□□□□ -0.41
SMAD5-205ENST00000509297 A0A1B0GTI1 187 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 FAM90A8PA6NJQ4 464 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 GYG2O15488 501 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 PRKYO43930 277 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 RBP4P02753 201 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 TK1P04183 234 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 CCL1P22362 96 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 DAPP51397 102 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 ERVK11-1P61568 191 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 DMRTC1Q5HYR2 192 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 BCL2L15Q5TBC7 163 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 AADACL4Q5VUY2 407 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 NXNL2Q5VZ03 156 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 OR14K1Q8NGZ2 314 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
SMAD5-205ENST00000509297 PIFOQ8TCI5 191 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 RORBQ92753 470 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 PPP1R14AQ96A00 147 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 ZNF488Q96MN9 340 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 PKIBQ9C010 78 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 CLN6Q9NWW5 311 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 POMPQ9Y244 141 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 SNX5Q9Y5X3 404 aa12.51□□□□□ -0.41
SMAD5-205ENST00000509297 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms