RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MED18Q9BUE0 208 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 NOX3Q9HBY0 568 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 THYN1Q9P016 225 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 V9GY05 133 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SLC5A10A0PJK1 596 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 G3V3Y1 287 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OR2F2O95006 317 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TIAF1O95411 115 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 IFNA10P01566 189 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 IFNA4P05014 189 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OR4Q2P0C623 313 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 PRF1P14222 555 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GMPRP36959 345 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 RPS27AP62979 156 aaKnown RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM128Q5BJH2 165 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF474Q6S9Z5 364 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 Q6ZSR9 355 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OR4P4Q8NGL7 312 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF420Q8TAQ5 688 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TMBIM1Q969X1 311 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 FBXO17Q96EF6 278 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 MS4A4EQ96PG1 132 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GDF15Q99988 308 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 P2RY13Q9BPV8 354 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 SPATA25Q9BR10 227 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CDIP1Q9H305 208 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 HHLA2Q9UM44 414 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 INSIG2Q9Y5U4 225 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 LINC00473A8K010 186 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GSC2O15499 205 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GABARAPO95166 117 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GJB5O95377 273 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 WISP3O95389 354 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 AIFM1O95831 613 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 IGFBP6P24592 240 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 AKR1C3P42330 323 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 HERV-K104P61576 105 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TWIST1Q15672 202 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 COLCA1Q6ZS62 124 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 PIGTQ969N2 578 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ACDQ96AP0 544 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 MCHR1Q99705 422 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GSX1Q9H4S2 264 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 KCNIP2Q9NS61 270 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 A0A0B4J2A0 478 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 A0A1W2PPK0 400 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 A0A1W2PQM1 296 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CLDN24A6NM45 220 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 EIF3GO75821 320 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 SERPINE1P05121 402 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 PRSS1P07477 247 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 BPGMP07738 259 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 KLK2P20151 261 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 RAB3AP20336 220 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 RIDAP52758 137 aaKnown RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GNG3P63215 75 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TESK1Q15569 626 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 DCAF10Q5QP82 559 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 DEFB128Q7Z7B8 93 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 C9orf40Q8IXQ3 194 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CLDN22Q8N7P3 220 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CHST4Q8NCG5 386 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OR4K17Q8NGC6 315 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OR5K1Q8NHB7 308 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 C10orf82Q8WW14 230 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CDX2Q99626 313 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 RBM22Q9NW64 420 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 WSB2Q9NYS7 404 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 SHPKQ9UHJ6 478 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 KLF2Q9Y5W3 355 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 MEIS3P1A6NDR6 274 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF98A6NK75 572 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 F5H5K5 113 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CCL24O00175 119 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 GPR183P32249 361 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 NKX2-1P43699 371 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ATP4BP51164 291 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF140P52738 457 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 POU3F1Q03052 451 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 PRDX4Q13162 271 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 MS4A18Q3C1V0 323 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF385BQ569K4 471 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OLFML2AQ68BL7 652 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CYHR1Q6ZMK1 362 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF676Q8N7Q3 588 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TPRX1Q8N7U7 411 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 OR10X1Q8NGY0 326 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 FLYWCH2Q96CP2 140 aaKnown RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 WDYHV1Q96HA8 205 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 LYSMD1Q96S90 227 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF471Q9BX82 626 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 EIF5A2Q9GZV4 153 aaKnown RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TCEAL2Q9H3H9 227 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-209ENST00000508871 WDR54Q9H977 334 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 MED29Q9NX70 200 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF224Q9NZL3 707 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 CSNK1G3Q9Y6M4 447 aa3.42□□□□□ -1.86
NEDD4-209ENST00000508871 TRAV8-2A0A0B4J237 113 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 H7C1C5 153 aa3.41□□□□□ -1.86
NEDD4-209ENST00000508871 TNFRSF11BO00300 401 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms