RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CEACAM21Q3KPI0 293 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 LRRC10Q5BKY1 277 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 C12orf73Q69YU5 71 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 MOB3CQ70IA8 216 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 MEPCEQ7L2J0 689 aaKnown RBP13.3□□□□□ -0.28
LMNA-222ENST00000508500 PNKDQ8N490 385 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 TCEANCQ8N8B7 351 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 FBLIM1Q8WUP2 373 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 SSMEM1Q8WWF3 244 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 TRUB1Q8WWH5 349 aaKnown RBP13.3□□□□□ -0.28
LMNA-222ENST00000508500 AQP3Q92482 292 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 DMRTB1Q96MA1 342 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 TEX12Q9BXU0 123 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 PRRG3Q9BZD7 231 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
LMNA-222ENST00000508500 ADGRL4Q9HBW9 690 aa13.3□□□□□ -0.28
LMNA-222ENST00000508500 NUFIP1Q9UHK0 495 aaKnown RBP13.3□□□□□ -0.28
LMNA-222ENST00000508500 A0A1B0GTI1 187 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 NDUFA7O95182 113 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 PSG2P11465 335 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 RAG2P55895 527 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 ISL1P61371 349 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 GNG3P63215 75 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 KCTD21Q4G0X4 260 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
LMNA-222ENST00000508500 PLEKHG7Q6ZR37 379 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 SSX6Q7RTT6 188 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 ZNRF1Q8ND25 227 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 OR5A2Q8NGI9 324 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 FAM81AQ8TBF8 368 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 WFDC12Q8WWY7 111 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 ASB17Q8WXJ9 295 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 H1FXQ92522 213 aaKnown RBP13.29□□□□□ -0.28
LMNA-222ENST00000508500 HIST1H2AAQ96QV6 131 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 CNN2Q99439 309 aaKnown RBP13.29□□□□□ -0.28
LMNA-222ENST00000508500 SLC25A10Q9UBX3 287 aaPredicted RBP13.29□□□□□ -0.28
LMNA-222ENST00000508500 BLOC1S6Q9UL45 172 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 PIGLQ9Y2B2 252 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 MYRFQ9Y2G1 1151 aa13.29□□□□□ -0.28
LMNA-222ENST00000508500 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 GPR137BO60478 399 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 RPSAP08865 295 aaKnown RBP13.28□□□□□ -0.28
LMNA-222ENST00000508500 GNAO1P09471 354 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 ATP6V1B1P15313 513 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 POLR2IP36954 125 aaKnown RBP13.28□□□□□ -0.28
LMNA-222ENST00000508500 RIDAP52758 137 aaKnown RBP13.28□□□□□ -0.28
LMNA-222ENST00000508500 CAV3P56539 151 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 RIPPLY1Q0D2K3 151 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 TAF9Q16594 264 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 NXNL2Q5VZ03 156 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 TMEM42Q69YG0 159 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 HCP5Q6MZN7 132 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 ZNF322Q6U7Q0 402 aaPredicted RBP13.28□□□□□ -0.28
LMNA-222ENST00000508500 SLC35F2Q8IXU6 374 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 TBC1D15Q8TC07 691 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 TMEM163Q8TC26 289 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 DYRK2Q92630 601 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 MED30Q96HR3 178 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 ZNF488Q96MN9 340 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 IL4I1Q96RQ9 567 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 ZNRD1Q9P1U0 126 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 MRM2Q9UI43 246 aaKnown RBP13.28□□□□□ -0.28
LMNA-222ENST00000508500 IKZF2Q9UKS7 526 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 TMEM14AQ9Y6G1 99 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 V9GYS6 101 aa13.28□□□□□ -0.28
LMNA-222ENST00000508500 NKX6-3A6NJ46 265 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 OR5B21A6NL26 309 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 SYNGR1O43759 233 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 DHRS3O75911 302 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 CRYBA1P05813 215 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 CCDC159P0C7I6 412 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 GABRA2P47869 451 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 ZNF829Q3KNS6 432 aaPredicted RBP13.27□□□□□ -0.29
LMNA-222ENST00000508500 PDLIM3Q53GG5 364 aaPredicted RBP13.27□□□□□ -0.29
LMNA-222ENST00000508500 ZBTB37Q5TC79 503 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 PLCXD3Q63HM9 321 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 OLFML2AQ68BL7 652 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 HAGHLQ6PII5 290 aaPredicted RBP13.27□□□□□ -0.29
LMNA-222ENST00000508500 Q6ZSR3 168 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 ELMOD2Q8IZ81 293 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 CD177Q8N6Q3 437 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 OR14K1Q8NGZ2 314 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 OR4F5Q8NH21 305 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 BEX1Q9HBH7 125 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 SCOCQ9UIL1 159 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 R4GMQ9 66 aa13.27□□□□□ -0.29
LMNA-222ENST00000508500 A0A1B0GUS0 222 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 CLPSL1A2RUU4 121 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 A6NIN4 97 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 NPFFO15130 113 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 MRPS14O60783 128 aaKnown RBP13.26□□□□□ -0.29
LMNA-222ENST00000508500 KNG1P01042 644 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 NDUFB7P17568 137 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 SLC25A30Q5SVS4 291 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 C6orf141Q5SZD1 244 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
LMNA-222ENST00000508500 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms