RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MOB1AQ9H8S9 216 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ADGRL4Q9HBW9 690 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 KRT84Q9NSB2 600 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 GTF2A1LQ9UNN4 478 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 DSCAML1Q8TD84 2053 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 SLC22A31A6NKX4 558 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 RFPL4AA6NLU0 287 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 ZAR1LA6NP61 321 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 LOC110117498-PIK3R3F6TDL0 507 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 RFPL4AL1F8VTS6 287 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 J3QT63 122 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 M0QZ24 198 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 TIMM23O14925 209 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 GSC2O15499 205 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 TSPAN9O75954 239 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 PAHP00439 452 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 NRASP01111 189 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 PGA5P0DJD9 388 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 ATP6AP1Q15904 470 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 MIDNQ504T8 468 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 PDLIM3Q53GG5 364 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 BCL2L15Q5TBC7 163 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 SLX4IPQ5VYV7 408 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 NXNL2Q5VZ03 156 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 C12orf73Q69YU5 71 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 ELMOD2Q8IZ81 293 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 FAM185AQ8N0U4 392 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 CD177Q8N6Q3 437 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 TCEANCQ8N8B7 351 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 BEND2Q8NDZ0 799 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 OR5D13Q8NGL4 314 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 AJUBAQ96IF1 538 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 APOL4Q9BPW4 351 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 RBM4BQ9BQ04 359 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 CADM1Q9BY67 442 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 GPR173Q9NS66 373 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 RASL12Q9NYN1 266 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 MRM2Q9UI43 246 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 R4GMQ9 66 aa10.61□□□□□ -0.71
HMGCS1-205ENST00000508319 A0A1B0GTI1 187 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 PQLC2LA1A4F0 135 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 H0YAE9 185 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 DLGAP1O14490 977 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 ANGPTL7O43827 346 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 TGFBR2P37173 567 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 HAAOP46952 286 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 CEBPDP49716 269 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 CAPZA1P52907 286 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 BLMHQ13867 455 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 CLVS2Q5SYC1 327 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 KDM4DQ6B0I6 523 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 Q6ZSR3 168 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 SSX6Q7RTT6 188 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF573Q86YE8 665 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 C11orf42Q8N5U0 333 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 OR14K1Q8NGZ2 314 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 TMEM163Q8TC26 289 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 MNTQ99583 582 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 NRIP2Q9BQI9 281 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 GABARAPL1Q9H0R8 117 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 HES4Q9HCC6 221 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 TCF7L1Q9HCS4 588 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 CLN6Q9NWW5 311 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 OR52A1Q9UKL2 312 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 SF3B6Q9Y3B4 125 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 V9GYS6 101 aa10.6□□□□□ -0.71
HMGCS1-205ENST00000508319 A6NIN4 97 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 DHRS7CA6NNS2 312 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF670-ZNF695F2Z2N8 137 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 SLC1A7O00341 560 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 DYNC1I1O14576 645 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 NOS1APO75052 506 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 TSPAN15O95858 294 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 CCL1P22362 96 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 MPZP25189 248 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 EGR3Q06889 387 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 CALHM1Q8IU99 346 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 GID4Q8IVV7 300 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 MKXQ8IYA7 352 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 BATF2Q8N1L9 274 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF561Q8N587 486 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 IL4I1Q96RQ9 567 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 PPA2Q9H2U2 334 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 FAM53CQ9NYF3 392 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 SLC22A13Q9Y226 551 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 SNX5Q9Y5X3 404 aa10.59□□□□□ -0.71
HMGCS1-205ENST00000508319 TET2Q6N021 2002 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 G3V2T6 193 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 H3BUX3 64 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 NXPH2O95156 264 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 PAX6P26367 422 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 PRDX2P32119 198 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 ACTR3P61158 418 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 ERVK11-1P61568 191 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 BNIP1Q12981 228 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 ZNF273Q14593 569 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 LRRC75BQ2VPJ9 315 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 TMEM200BQ69YZ2 307 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms