RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 EGLN1Q9GZT9 426 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 KCNK15Q9H427 330 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 PLGRKTQ9HBL7 147 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 GCM1Q9NP62 436 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 C1orf123Q9NWV4 160 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 DCAF16Q9NXF7 216 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 TREM2Q9NZC2 230 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 CACNG2Q9Y698 323 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 CELSR2Q9HCU4 2923 aa11.98□□□□□ -0.49
RNF4-208ENST00000507247 A0A0B4J203 849 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 AIPO00170 330 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 LY6HO94772 140 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 TNFRSF1AP19438 455 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 HTR2CP28335 458 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 PTGFRP43088 359 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 PSMD7P51665 324 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 CLDN12P56749 244 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 IL24Q13007 206 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 P2RY14Q15391 338 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 BATF2Q8N1L9 274 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 PNLDC1Q8NA58 520 aaKnown RBP11.97□□□□□ -0.49
RNF4-208ENST00000507247 OR6M1Q8NGM8 313 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 Q8TCH9 128 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 YIPF5Q969M3 257 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 SLAMF9Q96A28 289 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 CPNE2Q96FN4 548 aaPredicted RBP11.97□□□□□ -0.49
RNF4-208ENST00000507247 C1orf147Q96MC9 270 aaPredicted RBP11.97□□□□□ -0.49
RNF4-208ENST00000507247 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 FN3KRPQ9HA64 309 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 MTCH1Q9NZJ7 389 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 DAPK2Q9UIK4 370 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 MRPS28Q9Y2Q9 187 aaKnown RBP11.97□□□□□ -0.49
RNF4-208ENST00000507247 AKAP6Q13023 2319 aa11.97□□□□□ -0.49
RNF4-208ENST00000507247 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 LYNX1G3V0Z9 82 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 CDC14BO60729 498 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 TMEM225BP0DP42 221 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 LYNX1P0DP58 116 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 ZNF182P17025 639 aaPredicted RBP11.96□□□□□ -0.49
RNF4-208ENST00000507247 EGR1P18146 543 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 RIN1Q13671 783 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 RAB11BQ15907 218 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 IDNKQ5T6J7 187 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 AWAT2Q6E213 333 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 GLIPR1L1Q6UWM5 242 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 ASCL4Q6XD76 172 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 PXT1Q8NFP0 134 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 OR10K1Q8NGX5 313 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 OR51F2Q8NH61 342 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 NEU4Q8WWR8 484 aaPredicted RBP11.96□□□□□ -0.49
RNF4-208ENST00000507247 DCUN1D5Q9BTE7 237 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 STEAP1Q9UHE8 339 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 PPP1R3CQ9UQK1 317 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 ITPR2Q14571 2701 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
RNF4-208ENST00000507247 IGHV1-69-2A0A0G2JMI3 117 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 F8VVB4 439 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 F8VWA3 439 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 AKR7A2O43488 359 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 CYB5R3P00387 301 aaPredicted RBP11.95□□□□□ -0.5
RNF4-208ENST00000507247 PGA5P0DJD9 388 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 BCL3P20749 454 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 COL8A2P25067 703 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 NPBWR2P48146 333 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 RORCP51449 518 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 MKXQ8IYA7 352 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 SAXO1Q8IYX7 474 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 GCSAMQ8N6F7 178 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 ZSCAN4Q8NAM6 433 aaPredicted RBP11.95□□□□□ -0.5
RNF4-208ENST00000507247 OR51D1Q8NGF3 324 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 LRRC29Q8WV35 223 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 ERGIC1Q969X5 290 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 SMURF1Q9HCE7 757 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 ZNF701Q9NV72 531 aaPredicted RBP11.95□□□□□ -0.5
RNF4-208ENST00000507247 CCDC59Q9P031 241 aaKnown RBP11.95□□□□□ -0.5
RNF4-208ENST00000507247 ING4Q9UNL4 249 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 POLDIP2Q9Y2S7 368 aa11.95□□□□□ -0.5
RNF4-208ENST00000507247 DCHS2Q6V1P9 2916 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 A0A1W2PP11 408 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 WNT9BO14905 357 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 RP2O75695 350 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 KDM4BO94953 1096 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 PAHP00439 452 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
RNF4-208ENST00000507247 IGHV4-39P01824 125 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 SFTPBP07988 381 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
RNF4-208ENST00000507247 CFHR2P36980 270 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 EFNA4P52798 201 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 ERVK11-1P61568 191 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 QRFPP83859 136 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 PLA2G7Q13093 441 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 ZNF181Q2M3W8 571 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 CNPY1Q3B7I2 92 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 FAM201AQ5SY85 155 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 OR10K2Q6IF99 312 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 CROCCP3Q8IVE0 287 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms