RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 RNF39Q9H2S5 420 aa5.46□□□□□ -1.53
PDE4D-216ENST00000507116 TUBB1Q9H4B7 451 aa5.46□□□□□ -1.53
PDE4D-216ENST00000507116 WNT6Q9Y6F9 365 aa5.46□□□□□ -1.53
PDE4D-216ENST00000507116 COL14A1Q05707 1796 aaKnown RBP5.46□□□□□ -1.53
PDE4D-216ENST00000507116 DOT1LQ8TEK3 1739 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 GBF1Q92538 1859 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TRBV6-7A0A0A0MS04 114 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TRAV38-1A0A0B4J264 116 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 A0A0J9YY10 115 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 A0A1B0GX78 115 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 OR2T8A6NH00 312 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 MINDY4BA8MYZ0 360 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 GAPDHSO14556 408 aaPredicted RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 IFNA1P01562 189 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SNRPBP14678 240 aaKnown RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 HOXB9P17482 250 aaPredicted RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 FUT3P21217 361 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 FBLP22087 321 aaKnown RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 GDF5P43026 501 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 PTH2RP49190 550 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 P2RX1P51575 399 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 HMGCS2P54868 508 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TPPP2P59282 170 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 ZXDBP98169 803 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 VN1R17PQ8TDU5 208 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TMEM174Q8WUU8 243 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SUSD6Q92537 303 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SNRNP25Q9BV90 132 aaKnown RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TMUB1Q9BVT8 246 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 IKZF5Q9H5V7 419 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 MEGF6O75095 1541 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 QSER1Q2KHR3 1735 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TCRBV5S1A1TA0A578 114 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 NPEPPSL1A6NEC2 478 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 FAM227AF5H4B4 570 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 GDF9O60383 454 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TRUB2O95900 331 aaKnown RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 CTSEP14091 401 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 CD34P28906 385 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SOAT1P35610 550 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 CFHR2P36980 270 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 PAX9P55771 341 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 FAM3BP58499 235 aaPredicted RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 MEF2BQ02080 365 aaPredicted RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 FUT7Q11130 342 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 CRB2Q5IJ48 1285 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 UBE2NLQ5JXB2 153 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SPATA31B1PQ5VZV4 182 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 DPPA3Q6W0C5 159 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 CBLL1Q75N03 491 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 AMIGO3Q86WK7 504 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 C1orf174Q8IYL3 243 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 LINC00471Q8N535 108 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 TMEM217Q8N7C4 229 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 OR10S1Q8NGN2 331 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 OR6N2Q8NGY6 317 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 MARCH1Q8TCQ1 289 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 CXorf40BQ96DE9 158 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 SGIP1Q9BQI5 828 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 NDFIP1Q9BT67 221 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 POLR2J3Q9H1A7 115 aaKnown RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 FGF20Q9NP95 211 aaPredicted RBP5.46□□□□□ -1.54
PDE4D-216ENST00000507116 LRIT1Q9P2V4 623 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 B3GALT5Q9Y2C3 310 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 ALS2Q96Q42 1657 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 PIKFYVEQ9Y2I7 2098 aa5.46□□□□□ -1.54
PDE4D-216ENST00000507116 NRAPQ86VF7 1730 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 TNFRSF6BO95407 300 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 IL3P08700 152 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 CELP19835 753 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 ARL4DP49703 201 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 GZMMP51124 257 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 ADAM8P78325 824 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 RAB40BQ12829 278 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 EXOSC7Q15024 291 aaKnown RBP5.45□□□□□ -1.54
PDE4D-216ENST00000507116 SLC25A52Q3SY17 297 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 C1orf220Q5T0J3 134 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 FAM102AQ5T9C2 384 aaPredicted RBP5.45□□□□□ -1.54
PDE4D-216ENST00000507116 LRRC69Q6ZNQ3 347 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 DEFB125Q8N687 156 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 FADS6Q8N9I5 356 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 OR5AR1Q8NGP9 310 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 SUSD3Q96L08 255 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 SMIM3Q9BZL3 60 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 RALYQ9UKM9 306 aaKnown RBP5.45□□□□□ -1.54
PDE4D-216ENST00000507116 GPR132Q9UNW8 380 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 MRPS33Q9Y291 106 aaKnown RBP5.45□□□□□ -1.54
PDE4D-216ENST00000507116 DOCK1Q14185 1865 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 FRMPD3Q5JV73 1810 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 DUOX1Q9NRD9 1551 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 FAM95CA0A1B0GW59 222 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 SMIM9A6NGZ8 99 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 SAP18O00422 153 aaKnown RBP5.45□□□□□ -1.54
PDE4D-216ENST00000507116 B4GALT3O60512 393 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 MMP9P14780 707 aa5.45□□□□□ -1.54
PDE4D-216ENST00000507116 RPS4Y1P22090 263 aaKnown RBP5.45□□□□□ -1.54
PDE4D-216ENST00000507116 CDKN2AP42771 156 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms