RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 RGS10O43665 173 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 FCN3O75636 299 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
NPHP4-210ENST00000506941 MUC1P15941 1255 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-210ENST00000506941 AZGP1P25311 298 aaKnown RBP15.15■□□□□ 0.02
NPHP4-210ENST00000506941 SOX2P48431 317 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 TAS2R43P59537 309 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 RPS11P62280 158 aaKnown RBP eCLIP15.15■□□□□ 0.02
NPHP4-210ENST00000506941 MICBQ29980 383 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 RBM48Q5RL73 367 aaKnown RBP15.15■□□□□ 0.02
NPHP4-210ENST00000506941 ZNF841Q6ZN19 808 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 GPR148Q8TDV2 347 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 ZCCHC4Q9H5U6 513 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 SNTG1Q9NSN8 517 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 TMEM160Q9NX00 188 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 LRCH1Q9Y2L9 728 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 NAV3Q8IVL0 2385 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 A0A1B0GW55 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 ADAM20O43506 726 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 TFF1P04155 84 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L2P0CJ85 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L3P0CJ86 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L4P0CJ87 422 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L5P0CJ88 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L6P0CJ89 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L7P0CJ90 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 PGA5P0DJD9 388 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 AMY2BP19961 511 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 GLRA1P23415 457 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 PITPNBP48739 271 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 KCNJ8Q15842 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 CR1LQ2VPA4 569 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 ESCO2Q56NI9 601 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 STUMQ69YW2 141 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 CRIP3Q6Q6R5 217 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4L9Q6RFH8 374 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-210ENST00000506941 BATF2Q8N1L9 274 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 POC1AQ8NBT0 407 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DNAAF1Q8NEP3 725 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 OR5T2Q8NGG2 359 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 OR8B3Q8NGG8 313 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 ZNF671Q8TAW3 534 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 BORCS8Q96FH0 119 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 SPACA5Q96QH8 159 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 OR8B2Q96RD0 313 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 SSBP3Q9BWW4 388 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-210ENST00000506941 PKIBQ9C010 78 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 Q9H521 79 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 SMURF1Q9HCE7 757 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 DUX4Q9UBX2 424 aa15.14■□□□□ 0.01
NPHP4-210ENST00000506941 POLR3KQ9Y2Y1 108 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-210ENST00000506941 TRBV5-5A0A0J9YX44 114 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 TRAPPC2LH3BP13 241 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 FOXH1O75593 365 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 PLATP00750 562 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 OCM2P0CE71 109 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 HOXB4P17483 251 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-210ENST00000506941 CELP19835 753 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 CPT2P23786 658 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 RBP2P50120 134 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 BDH1Q02338 343 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 ACSM1Q08AH1 577 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 IL24Q13007 206 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 FAM120AOSQ5T036 256 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 ZNF529Q6P280 563 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 IL17RELQ6ZVW7 336 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 NLRC3Q7RTR2 1065 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 PRSS48Q7RTY5 328 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 SERPINA12Q8IW75 414 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 TMEM106AQ96A25 262 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 SPSB1Q96BD6 273 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 C12orf43Q96C57 262 aaKnown RBP15.13■□□□□ 0.01
NPHP4-210ENST00000506941 ORAI1Q96D31 301 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 OPALINQ96PE5 141 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 CCL13Q99616 98 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 NRIP2Q9BQI9 281 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 MMP26Q9NRE1 261 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 DNAJB11Q9UBS4 358 aa15.13■□□□□ 0.01
NPHP4-210ENST00000506941 F8VVB4 439 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 F8VWA3 439 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 NDUFA2O43678 99 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 SULT1B1O43704 296 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 NOS1APO75052 506 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-210ENST00000506941 CRLF1O75462 422 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 PRKACBP22694 351 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 MAP2K4P45985 399 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 ERVK11-1P61568 191 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 GNB2P62879 340 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 PAX2Q02962 417 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 SPHARQ15513 63 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 YIF1BQ5BJH7 314 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 WDR25Q64LD2 544 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-210ENST00000506941 ACP7Q6ZNF0 438 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 LHFPL2Q6ZUX7 228 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 FGFRL1Q8N441 504 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 FAM216BQ8N7L0 139 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 OR51A2Q8NGJ7 313 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 OR5D14Q8NGL3 314 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 ANGPTL6Q8NI99 470 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 RFT1Q96AA3 541 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms