RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 IL4I1Q96RQ9 567 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TSC22D3Q99576 134 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 COQ7Q99807 217 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NIPSNAP1Q9BPW8 284 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 COPS4Q9BT78 406 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF426Q9BUY5 554 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NUDT9Q9BW91 350 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MND1Q9BWT6 205 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TAPBPLQ9BX59 468 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TSSK6Q9BXA6 273 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CDCA4Q9BXL8 241 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NXF5Q9H1B4 397 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 METTL7AQ9H8H3 244 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SIAEQ9HAT2 523 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NRN1Q9NPD7 142 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NANSQ9NR45 359 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CMC2Q9NRP2 79 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 INPP5EQ9NRR6 644 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TNFRSF19Q9NS68 423 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CENPMQ9NSP4 180 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 VNN3Q9NY84 501 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ANAPC11Q9NYG5 84 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TVP23BQ9NYZ1 205 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 STMN3Q9NZ72 180 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 KLRF1Q9NZS2 232 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CTSFQ9UBX1 484 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PISDQ9UG56 409 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MIOXQ9UGB7 285 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 WARS2Q9UGM6 360 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RSL24D1Q9UHA3 163 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 KLHL21Q9UJP4 597 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF229Q9UJW7 825 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MOKQ9UQ07 419 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 FARSAQ9Y285 508 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF175Q9Y473 711 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CDH10Q9Y6N8 788 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TRPM6Q9BX84 2022 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MUC3AQ02505 3323 aa1.9□□□□□ -2.1
TOPBP1-205ENST00000506779 CDH23Q9H251 3354 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAV36DV7A0A075B6V5 113 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 IGLV3-32A0A0A0MS00 114 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PNMA8CA0A1B0GUJ8 204 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 LOC102725191A0A1B0GVB3 256 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A1W2PRG6 482 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DAPL1A0PJW8 107 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 A6NIZ1 184 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CLDN24A6NM45 220 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 WWP2O00308 870 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CCRL2O00421 344 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 XKRYO14609 159 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PHYHO14832 338 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MYL12BO14950 172 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ARPC3O15145 178 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NME2P1O60361 137 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 FADS1O60427 444 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 EIF1BO60739 113 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ICOSLGO75144 302 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ENTPD6O75354 484 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 WBP4O75554 376 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 KLF7O75840 302 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2J2O76002 312 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR7A10O76100 309 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TOXO94900 526 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 VAMP5O95183 116 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SOX14O95416 240 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 RAB36O95755 333 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 EPPINO95925 133 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 IGKV1D-16P01601 117 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CLPSP04118 112 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 THY1P04216 161 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 P04436 131 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CDK1P06493 297 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CD14P08571 375 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 STSP08842 583 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TACSTD2P09758 323 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 GKN3PP0CG01 181 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 FUT1P19526 365 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 GALP22466 123 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 AHCYP23526 432 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 F8A1P23610 371 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PSMB9P28065 219 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 HTR2AP28223 471 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SOX6P35712 828 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DLSTP36957 453 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NBL1P41271 181 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 GUCA1AP43080 201 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 RANBP1P43487 201 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CYB561P49447 251 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DAP3P51398 398 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DSCR4P56555 118 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TAS2R43P59537 309 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 RAP1BP61224 184 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ACTA2P62736 377 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 RAP1AP62834 184 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ACTG2P63267 376 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CXCL6P80162 114 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 HOXC5Q00444 222 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 BDH1Q02338 343 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF117Q03924 483 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 EMX1Q04741 257 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms