RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 APOL3O95236 402 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 KRT8P05787 483 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 PGA5P0DJD9 388 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 MPZP25189 248 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 CDC42P60953 191 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 ERVK11-1P61568 191 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC25A30Q5SVS4 291 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 ACP7Q6ZNF0 438 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 YIPF7Q8N8F6 280 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 SGMS2Q8NHU3 365 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 SSMEM1Q8WWF3 244 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 TRUB1Q8WWH5 349 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 RORBQ92753 470 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 TAF15Q92804 592 aaKnown RBP eCLIP7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 TMIGD2Q96BF3 282 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 TBX5Q99593 518 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 NRIP2Q9BQI9 281 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 CHIAQ9BZP6 476 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 HES4Q9HCC6 221 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 GPR173Q9NS66 373 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 GTF2A1LQ9UNN4 478 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 POMT1Q9Y6A1 747 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 A0A0U1RQK1 487 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 FAM181BA6NEQ2 426 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 RNASEK-C17orf49H0YIS7 233 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 J3QRE1 110 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 M0R1W7 72 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 EI24O14681 340 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 RPP14O95059 124 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 HAAOP46952 286 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 GABRA2P47869 451 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 RPL15P61313 204 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 SNRPGP62308 76 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF85Q03923 595 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 KPNB1Q14974 876 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 SMIM21Q3B7S5 101 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ZFP1Q6P2D0 407 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF573Q86YE8 665 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 CMTM4Q8IZR5 234 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 PRSS35Q8N3Z0 413 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNRF1Q8ND25 227 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 OR10H4Q8NGA5 316 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 NPRL2Q8WTW4 380 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 H1FXQ92522 213 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 RFKQ969G6 155 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 UBE2FQ969M7 185 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ANAPC16Q96DE5 110 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF488Q96MN9 340 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 SIRT7Q9NRC8 400 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 ONECUT1Q9UBC0 465 aa7.44□□□□□ -1.22
PDLIM5-209ENST00000506632 TRBV23-1A0A0A0MS06 115 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 ANKRD61A6NGH8 418 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 A6NIN4 97 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 RFPL4AA6NLU0 287 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 RFPL4AL1F8VTS6 287 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 ENTPD6O75354 484 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 NDUFA7O95182 113 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 NDUFB7P17568 137 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 GABRB1P18505 474 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 MDKP21741 143 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 KIR3DL2P43630 455 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 IER3P46695 156 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 ALDH3A2P51648 485 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 DLX1P56177 255 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 PRB3Q04118 309 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 IL24Q13007 206 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 KLRD1Q13241 179 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 UBE2V2Q15819 145 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 HCP5Q6MZN7 132 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 FIP1L1Q6UN15 594 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 CCDC121Q6ZUS5 278 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 CALHM1Q8IU99 346 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 PDZD9Q8IXQ8 264 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 CD177Q8N6Q3 437 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 CCDC54Q8NEL0 328 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 TMEM185AQ8NFB2 350 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 TBC1D15Q8TC07 691 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 DYRK2Q92630 601 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 C10orf35Q96D05 121 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 MBOAT4Q96T53 435 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 PKIBQ9C010 78 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 CHST5Q9GZS9 411 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 SLITRK2Q9H156 845 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 METTL8Q9H825 291 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 ELL3Q9HB65 397 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 IMPAD1Q9NX62 359 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 C1RLQ9NZP8 487 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNRD1Q9P1U0 126 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 POLDIP2Q9Y2S7 368 aa7.43□□□□□ -1.22
PDLIM5-209ENST00000506632 PKD1L1Q8TDX9 2849 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 IGKV1-27A0A075B6S5 117 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 LOC107986453A0A1B0GWG9 222 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 NPFFO15130 113 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms