RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 STUMQ69YW2 141 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 BTNL3Q6UXE8 466 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 ZNF841Q6ZN19 808 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 AHSA2Q719I0 299 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 EGFL6Q8IUX8 553 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 TEX29Q8N6K0 151 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 BPIFB6Q8NFQ5 453 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 OR5T2Q8NGG2 359 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 OR5AK2Q8NH90 309 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 HAVCR2Q8TDQ0 301 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 PP6455Q8WZ26 134 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 ST8SIA4Q92187 359 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 GGHQ92820 318 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 TMIGD2Q96BF3 282 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 C12orf43Q96C57 262 aaKnown RBP10.9□□□□□ -0.66
TCOF1-209ENST00000506630 ADAT3Q96EY9 351 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-209ENST00000506630 BORCS8Q96FH0 119 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 CCL13Q99616 98 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 MRI1Q9BV20 369 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 SMURF1Q9HCE7 757 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 CHCHD3Q9NX63 227 aaKnown RBP10.9□□□□□ -0.66
TCOF1-209ENST00000506630 NLKQ9UBE8 527 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 POLDIP2Q9Y2S7 368 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 CAB39Q9Y376 341 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-209ENST00000506630 INSIG2Q9Y5U4 225 aa10.9□□□□□ -0.66
TCOF1-209ENST00000506630 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 TRBV2A0A0J9YWF9 115 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 A0A1B0GW55 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 TMEM89A2RUT3 159 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 H0YJX3 145 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 TRIM77I1YAP6 450 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 TNFRSF13BO14836 293 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 SYNGR1O43759 233 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 PLATP00750 562 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 OCM2P0CE71 109 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 OCMP0CE72 109 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L2P0CJ85 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L3P0CJ86 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L4P0CJ87 422 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L5P0CJ88 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L6P0CJ89 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L7P0CJ90 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 PIPP12273 146 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 GABRA2P47869 451 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 TGM4P49221 684 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 GTF2A1P52655 376 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 ST3GAL4Q11206 333 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 LAIR2Q6ISS4 152 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4L9Q6RFH8 374 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 C1orf229Q6ZS94 237 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 STX19Q8N4C7 294 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 FAM216BQ8N7L0 139 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 FAM216AQ8WUB2 273 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 FBLIM1Q8WUP2 373 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 TSEN15Q8WW01 171 aaKnown RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 FGGYQ96C11 551 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 ZNF488Q96MN9 340 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 PDCD1LG2Q9BQ51 273 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 NUDT16L1Q9BRJ7 211 aaKnown RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 RASSF4Q9H2L5 321 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 CNOT2Q9NZN8 540 aaKnown RBP10.89□□□□□ -0.67
TCOF1-209ENST00000506630 KAAG1Q9UBP8 84 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 DUX4Q9UBX2 424 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 AUP1Q9Y679 476 aa10.89□□□□□ -0.67
TCOF1-209ENST00000506630 C22orf46C9J442 243 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 DVL1O14640 695 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 ENSAO43768 121 aaKnown RBP10.88□□□□□ -0.67
TCOF1-209ENST00000506630 ZFPL1O95159 310 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 ATP6V1G2O95670 118 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 TFF1P04155 84 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 ATF1P18846 271 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 AZGP1P25311 298 aaKnown RBP10.88□□□□□ -0.67
TCOF1-209ENST00000506630 FUT6P51993 359 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 IKZF1Q13422 519 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 CDK5R1Q15078 307 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 SMIM21Q3B7S5 101 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 ARMCX4Q5H9R4 360 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 IZUMO2Q6UXV1 221 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 C1QL2Q7Z5L3 287 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 ANGPTL5Q86XS5 388 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 CALHM1Q8IU99 346 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 FGFRL1Q8N441 504 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 POC1AQ8NBT0 407 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 OR13C9Q8NGT0 318 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 RAB40AQ8WXH6 277 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 GATAD2BQ8WXI9 593 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 JMJD8Q96S16 334 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 OPN4Q9UHM6 478 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 PSORS1C1Q9UIG5 152 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 DHDHQ9UQ10 334 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 MGAM2Q2M2H8 2515 aa10.88□□□□□ -0.67
TCOF1-209ENST00000506630 IGKV1-27A0A075B6S5 117 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 OR2AT4A6NND4 320 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 MYL12BO14950 172 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 NDUFB3O43676 98 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 RGS9O75916 674 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms