RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 H2AFVQ71UI9 128 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 BZW1Q7L1Q6 419 aaKnown RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 NDUFAF7Q7L592 441 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 PEX26Q7Z412 305 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 PDIK1LQ8N165 341 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 ZNF786Q8N393 782 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 LILRB4Q8NHJ6 448 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 SLC7A13Q8TCU3 470 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 PIH1D2Q8WWB5 315 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 LCN9Q8WX39 176 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 LRRC45Q96CN5 670 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 RMND5BQ96G75 393 aaPredicted RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 SH3GL3Q99963 347 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 C11orf70Q9BRQ4 267 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 FAM192AQ9GZU8 254 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 OR2AG1Q9H205 316 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 FGF20Q9NP95 211 aaPredicted RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 PARVAQ9NVD7 372 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 SHPKQ9UHJ6 478 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 CACNA1CQ13936 2221 aa3.79□□□□□ -1.8
HERC4-213ENST00000506515 ZNF106Q9H2Y7 1883 aaKnown RBP3.79□□□□□ -1.8
HERC4-213ENST00000506515 COL6A5A8TX70 2615 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 PLAC8L1A1L4L8 177 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 OR6C74A6NCV1 312 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 TXNDC9O14530 226 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 EEDO75530 441 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 POP7O75817 140 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 TSPAN13O95857 204 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 SERPINA7P05543 415 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 SMIM10L1P0DMW3 83 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 CA5AP35218 305 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 SPAM1P38567 509 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 TMED10P49755 219 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 NUTF2P61970 127 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 TGM3Q08188 693 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 PPIDQ08752 370 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 MADCAM1Q13477 382 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 VAX1Q5SQQ9 334 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 KCTD16Q68DU8 428 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 PRMT9Q6P2P2 845 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 DNAJC24Q6P3W2 148 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 WDR59Q6PJI9 974 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 Q6ZSR3 168 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 PHF13Q86YI8 300 aaPredicted RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 TRAPPC5Q8IUR0 188 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 ATPAF2Q8N5M1 289 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 ACBD4Q8NC06 268 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 CD300LFQ8TDQ1 290 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 NELFBQ8WX92 580 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 FAM104AQ969W3 186 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 PIK3IP1Q96FE7 263 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 DCUN1D1Q96GG9 259 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 SMIM10Q96HG1 83 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 TSSK3Q96PN8 268 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 P2RX4Q99571 388 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 SLC29A1Q99808 456 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 DHX35Q9H5Z1 703 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 KIR3DX1Q9H7L2 352 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 ANKRA2Q9H9E1 313 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 IMP3Q9NV31 184 aaKnown RBP3.78□□□□□ -1.8
HERC4-213ENST00000506515 CD84Q9UIB8 345 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 ING4Q9UNL4 249 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 ZNF835Q9Y2P0 537 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 CCDC88CQ9P219 2028 aa3.78□□□□□ -1.8
HERC4-213ENST00000506515 ACANP16112 2415 aa3.78□□□□□ -1.81
HERC4-213ENST00000506515 HIVEP2P31629 2446 aa3.78□□□□□ -1.81
HERC4-213ENST00000506515 OR2AG2A6NM03 316 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 CDC7O00311 574 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 AIM2O14862 343 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 CLOCKO15516 846 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 ICOSLGO75144 302 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 OR2J3O76001 311 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 UTS2O95399 124 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 SOD1P00441 154 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 RPN2P04844 631 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 PCK1P35558 622 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 SSR4P51571 173 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 ZNF136P52737 540 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 PRPSAP1Q14558 356 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 RCN1Q15293 331 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 MRPL23Q16540 153 aaKnown RBP3.77□□□□□ -1.81
HERC4-213ENST00000506515 ZSCAN26Q16670 478 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 HADHQ16836 314 aaKnown RBP3.77□□□□□ -1.81
HERC4-213ENST00000506515 TMEM255AQ5JRV8 349 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 TSPO2Q5TGU0 170 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 RAET1LQ5VY80 246 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 CARD17Q5XLA6 110 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 TTC23LQ6PF05 361 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 TMEM220Q6QAJ8 160 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 TTC29Q8NA56 475 aaPredicted RBP3.77□□□□□ -1.81
HERC4-213ENST00000506515 OR7G2Q8NG99 324 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 OR4E2Q8NGC2 313 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 OR5B3Q8NH48 314 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 ZNF502Q8TBZ5 544 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 ELMO1Q92556 727 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 PKNOX2Q96KN3 472 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 UTP23Q9BRU9 249 aaKnown RBP3.77□□□□□ -1.81
HERC4-213ENST00000506515 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
HERC4-213ENST00000506515 SAMSN1Q9NSI8 373 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms