RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 RHOCP08134 193 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 GNAO1P09471 354 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 GGT1P19440 569 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PMCHP20382 165 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PTNP21246 168 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 MAS1LP35410 378 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 HERVK_113P61574 105 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 LCN2P80188 198 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 HMGCS1Q01581 520 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PSG7Q13046 419 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 QPRTQ15274 297 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 TMEM183BQ1AE95 376 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 AADACL4Q5VUY2 407 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 ADNP2Q6IQ32 1131 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 C22orf39Q6P5X5 142 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 FAM122BQ7Z309 247 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 MRPL55Q7Z7F7 128 aaKnown RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF547Q8IVP9 402 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 TMEM183AQ8IXX5 376 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 VKORC1L1Q8N0U8 176 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 DEFB106AQ8N104 65 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CBR4Q8N4T8 237 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 LINC01555Q8NAE3 123 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR4C6Q8NH72 309 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 LMX1AQ8TE12 382 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 APH1BQ8WW43 257 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR8D1Q8WZ84 308 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 RDH5Q92781 318 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 RAB1CQ92928 201 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CIDECQ96AQ7 238 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CREB3L1Q96BA8 519 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 LRRC58Q96CX6 371 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 LRRC39Q96DD0 335 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PDXPQ96GD0 296 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 SIKE1Q9BRV8 207 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 STMN4Q9H169 189 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR2AG1Q9H205 316 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 XKR8Q9H6D3 395 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PDFQ9HBH1 243 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 ASCL3Q9NQ33 180 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PRR34Q9NV39 138 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 MCUBQ9NWR8 336 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CD84Q9UIB8 345 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CFAP45Q9UL16 551 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 TP53TG5Q9Y2B4 290 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 STK38LQ9Y2H1 464 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CACNG2Q9Y698 323 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 BZW2Q9Y6E2 419 aaKnown RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.05
TRAPPC11-205ENST00000506426 URB1O60287 2271 aaKnown RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 DENND4CQ5VZ89 1909 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 PLXND1Q9Y4D7 1925 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 MYOFQ9NZM1 2061 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 MYO9AB2RTY4 2548 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 LOC100653049A0A140TA62 436 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 NKX2-6A6NCS4 301 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 A6NDN8 102 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ERI2A8K979 691 aaKnown RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 TRIM49D1C9J1S8 452 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 PRAMEF26H0Y7S4 382 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 YKT6O15498 198 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 STX10O60499 249 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 KRT34O76011 436 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 TNFSF15O95150 251 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 HPRT1P00492 218 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGLV3-25P01717 112 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 FABP3P05413 133 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 PAEPP09466 180 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 RHOXF2BP0C7M4 288 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ADRB3P13945 408 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF19P17023 458 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 RCC1P18754 421 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 OMGP23515 440 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 CEACAM6P40199 344 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 CDKN2BP42772 138 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 CYB561P49447 251 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 YWHAEP62258 255 aaKnown RBP2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ATMQ13315 3056 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 PSG5Q15238 335 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 IRF4Q15306 451 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 POU2AF1Q16633 256 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 RPEL1Q2QD12 228 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 TMEM255AQ5JRV8 349 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 MLIPQ5VWP3 458 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 C12orf54Q6X4T0 127 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 Q6ZSR6 202 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 HORMAD1Q86X24 394 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM58AQ8N1B3 248 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZFP41Q8N8Y5 198 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 SNX31Q8N9S9 440 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 FBXO36Q8NEA4 188 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR52E2Q8NGJ4 325 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR51L1Q8NGJ5 315 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR6Q1Q8NGQ2 317 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR51F2Q8NH61 342 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 BLOC1S5Q8TDH9 187 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 NELFBQ8WX92 580 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 ISOC2Q96AB3 205 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM131CQ96AQ9 280 aa2.21□□□□□ -2.06
TRAPPC11-205ENST00000506426 SEH1LQ96EE3 360 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms