RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 LRRC29Q8WV35 223 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 AQP3Q92482 292 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 BORCS8Q96FH0 119 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 DERL3Q96Q80 235 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 PKIBQ9C010 78 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 METTL17Q9H7H0 456 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF696Q9H7X3 374 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 TMEM165Q9HC07 324 aa9.99□□□□□ -0.81
PDLIM5-208ENST00000504489 IGKV1-27A0A075B6S5 117 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 A0A087WXM4 84 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 LGALS8O00214 317 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 NOS1APO75052 506 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 RHBDL1O75783 438 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 SC5DO75845 299 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 ALDOBP05062 364 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 FSTP19883 344 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 RAB3AP20336 220 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 CPT2P23786 658 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 PSMA1P25786 263 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 MAPK3P27361 379 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 HAAOP46952 286 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 MTCP1P56278 107 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 LMO4P61968 165 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 IL24Q13007 206 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 ACSM3Q53FZ2 586 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 ARMCX4Q5H9R4 360 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 FAM201AQ5SY85 155 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 ASPHD2Q6ICH7 369 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 ANGPTL5Q86XS5 388 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 CALHM1Q8IU99 346 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 TSPAN14Q8NG11 270 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 CLDND2Q8NHS1 167 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 NPRL2Q8WTW4 380 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 OR14A2Q96R54 314 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 NR1H4Q96RI1 486 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 TMED9Q9BVK6 235 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 TAS2R4Q9NYW5 299 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 POLDIP2Q9Y2S7 368 aa9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 SF3B6Q9Y3B4 125 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-208ENST00000504489 KIAA2026Q5HYC2 2103 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TRAV38-1A0A0B4J264 116 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 ISPDA4D126 451 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 OOEPA6NGQ2 149 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF205O95201 554 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 IGHV2-5P01817 119 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 HEXAP06865 529 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 INHBBP09529 407 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 PGA5P0DJD9 388 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 MUC1P15941 1255 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 IGFBP3P17936 291 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 EGR1P18146 543 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TGFBR2P37173 567 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 PPP3R1P63098 170 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 KCNJ8Q15842 424 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 SSX1Q16384 188 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TMEM249Q2WGJ8 235 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 ZNF404Q494X3 552 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TEX36Q5VZQ5 186 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 SPICQ8N5J4 248 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 POC1AQ8NBT0 407 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 MAPK1IP1LQ8NDC0 245 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 OR51A2Q8NGJ7 313 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 PHYHIPQ92561 330 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 RAB39BQ96DA2 213 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 C1orf159Q96HA4 380 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 GAL3ST1Q99999 423 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TMEM246Q9BRR3 403 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TMEM138Q9NPI0 162 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 CKLFQ9UBR5 152 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 FOXJ3Q9UPW0 622 aa9.97□□□□□ -0.81
PDLIM5-208ENST00000504489 TRAV8-7A0A075B6U6 113 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 A0A1W2PPK0 400 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 TRIM64CA6NLI5 447 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 F5H0A9 414 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 CCRL2O00421 344 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 TNFRSF13BO14836 293 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 PIN1P1O15428 100 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 MAGEB3O15480 346 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 AKR7A2O43488 359 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 NDUFA2O43678 99 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 SYNGR1O43759 233 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 INMTO95050 263 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 HCKP08631 526 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 GABRA5P31644 462 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 CD80P33681 288 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 RPS25P62851 125 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 HOXA4Q00056 320 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 PDZK1IP1Q13113 114 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 KISS1Q15726 138 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 MICBQ29980 383 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 SYT6Q5T7P8 510 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 SFRP4Q6FHJ7 346 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 CRIP3Q6Q6R5 217 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 TMEM91Q6ZNR0 172 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 DCDC5Q6ZRR9 648 aa9.96□□□□□ -0.82
PDLIM5-208ENST00000504489 CEACAM19Q7Z692 300 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms