RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TCF23Q7RTU1 214 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 CSNK2A3Q8NEV1 391 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 LZICQ8WZA0 190 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 PIGCQ92535 297 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 PRRC1Q96M27 445 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 ZNF488Q96MN9 340 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 OR8B4Q96RC9 309 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 KCNJ15Q99712 375 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 RPRD1BQ9NQG5 326 aaKnown RBP9.71□□□□□ -0.86
LSM6-204ENST00000504181 CCDC167Q9P0B6 97 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 OR14J1Q9UGF5 321 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 BAG5Q9UL15 447 aa9.71□□□□□ -0.86
LSM6-204ENST00000504181 PSKH1P11801 424 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 YAP1P46937 504 aaKnown RBP9.7□□□□□ -0.86
LSM6-204ENST00000504181 FOXE3Q13461 319 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 PMS2P11Q13670 270 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 SMIM21Q3B7S5 101 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 TBPL2Q6SJ96 375 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 DLEU7Q6UYE1 221 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 ZNF730Q6ZMV8 503 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 ZBTB49Q6ZSB9 765 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 FTMTQ8N4E7 242 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 FAM71E2Q8N5Q1 922 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 OR4C15Q8NGM1 316 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 OR1N2Q8NGR9 330 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 EME1Q96AY2 570 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 NMNAT3Q96T66 252 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 NABP2Q9BQ15 211 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 CENPMQ9NSP4 180 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 LGALS13Q9UHV8 139 aa9.7□□□□□ -0.86
LSM6-204ENST00000504181 A0A087WUU8 490 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 FAM172BPA6NC97 362 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 OR6C68A6NDL8 312 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 LEUTXA8MZ59 168 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 MMP23AO75900 390 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 TXNDC12O95881 172 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 RENP00797 406 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 ARSBP15848 533 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 CX3CR1P49238 355 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 RPS6KA3P51812 740 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 STX1BP61266 288 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 CBX1P83916 185 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 ZNF616Q08AN1 781 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 BAIAP2L2Q6UXY1 529 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 DCXRQ7Z4W1 244 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 HAPLN4Q86UW8 402 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 ZDHHC23Q8IYP9 409 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 BATF2Q8N1L9 274 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 ASCC1Q8N9N2 400 aaKnown RBP9.69□□□□□ -0.86
LSM6-204ENST00000504181 MNS1Q8NEH6 495 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 ZNF671Q8TAW3 534 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 FAM46AQ96IP4 442 aaKnown RBP9.69□□□□□ -0.86
LSM6-204ENST00000504181 GPX7Q96SL4 187 aaPredicted RBP9.69□□□□□ -0.86
LSM6-204ENST00000504181 OR51I2Q9H344 312 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 RASL12Q9NYN1 266 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 SIGLEC7Q9Y286 467 aa9.69□□□□□ -0.86
LSM6-204ENST00000504181 ZNF732B4DXR9 585 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 J3KTA2 159 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 AP4M1O00189 453 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 PSMD9O00233 223 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 PSPNO60542 156 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 BRI3O95415 125 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 ELANEP08246 267 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 FAM106CPP0CH98 169 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 ACKR3P25106 362 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 IFNA8P32881 189 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 MNDAP41218 407 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 FXYD6P3P58550 94 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 HES1Q14469 280 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 TRAM2Q15035 370 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 SNCBQ16143 134 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 FAM53AQ6NSI3 398 aaPredicted RBP9.68□□□□□ -0.86
LSM6-204ENST00000504181 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 MBOAT2Q6ZWT7 520 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 FAM57BQ71RH2 274 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 GDPD3Q7L5L3 318 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 ZBTB46Q86UZ6 589 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 CATSPERDQ86XM0 798 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 TIGD4Q8IY51 512 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 OR10A6Q8NH74 314 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 AQP3Q92482 292 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 SLAMF6Q96DU3 332 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 ERMAPQ96PL5 475 aaPredicted RBP9.68□□□□□ -0.86
LSM6-204ENST00000504181 OR5B12Q96R08 314 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 HIPK2Q9H2X6 1198 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 GNB4Q9HAV0 340 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 ABCB9Q9NP78 766 aa9.68□□□□□ -0.86
LSM6-204ENST00000504181 MAGEA13PA6NCF6 341 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 ARRDC5A6NEK1 342 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 CXorf65A6NEN9 183 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 TVP23AA6NH52 213 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 C12orf77C9JDV5 145 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 K7N7A8 449 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 FGF16O43320 207 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 TMEM11P17152 192 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 CFL1P23528 166 aaKnown RBP9.67□□□□□ -0.86
LSM6-204ENST00000504181 GNB1P62873 340 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 BDH1Q02338 343 aa9.67□□□□□ -0.86
LSM6-204ENST00000504181 HNF4GQ14541 408 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms