RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ZNF256Q9Y2P7 627 aaPredicted RBP2.86□□□□□ -1.95
USP46-205ENST00000504078 NOP16Q9Y3C1 178 aaKnown RBP2.86□□□□□ -1.95
USP46-205ENST00000504078 SMAD5-AS1Q9Y6J3 95 aa2.86□□□□□ -1.95
USP46-205ENST00000504078 V9GYQ6 96 aa2.86□□□□□ -1.95
USP46-205ENST00000504078 FRAS1Q86XX4 4008 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 A0A087WUU8 490 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 IGHV2-26A0A0B4J1V2 119 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 TMEM120BA0PK00 339 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 RFPL4AA6NLU0 287 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ANXA2P2A6NMY6 339 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 VGLL3A8MV65 326 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PRR23D1E9PI22 279 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 RFPL4AL1F8VTS6 287 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 H3BSH0 61 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 CCL24O00175 119 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 FFAR1O14842 300 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ANGPT2O15123 496 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 SLC22A2O15244 555 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 MMP23AO75900 390 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 NDUFB2O95178 105 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ZNF682O95780 498 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 RENP00797 406 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 AMY1AP04745 511 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 AMY2AP04746 511 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ACAA1P09110 424 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 PRR23D2P0DMB1 279 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 CLUP10909 449 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ACKR3P25106 362 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 GRK5P34947 590 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 NAA10P41227 235 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 SLC25A1P53007 311 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 SNU13P55769 128 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 CAV3P56539 151 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 OR12D2P58182 307 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ZNF121P58317 390 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 ACTA2P62736 377 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ACTG2P63267 376 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ACTC1P68032 377 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ACTA1P68133 377 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 FAM3AP98173 230 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PRKCDQ05655 676 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ST3GAL3Q11203 375 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 EIF2B1Q14232 305 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 RBM39Q14498 530 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 KRT72Q14CN4 511 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 TRAM2Q15035 370 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 TAF13Q15543 124 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ZBED5Q49AG3 693 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 UTF1Q5T230 341 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 C9orf66Q5T8R8 295 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PRAMEF5Q5TYX0 476 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ZNF626Q68DY1 528 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 TMEM200BQ69YZ2 307 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 FAM53AQ6NSI3 398 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 MZT2AQ6P582 158 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 HAGHLQ6PII5 290 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 DNM1P34Q6PK57 102 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 CCDC80Q76M96 950 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 TSEN54Q7Z6J9 526 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 CPLX4Q7Z7G2 160 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 CATSPERDQ86XM0 798 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 OFCC1Q8IZS5 231 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 OSR2Q8N2R0 312 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 C11orf42Q8N5U0 333 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PROKR2Q8NFJ6 384 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 OR2T27Q8NH04 317 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 OR5K1Q8NHB7 308 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 TRMT10AQ8TBZ6 339 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 ZNRF4Q8WWF5 429 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 LIPHQ8WWY8 451 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PIGCQ92535 297 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 SPTSSAQ969W0 71 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 RNF170Q96K19 258 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 CDRT15Q96T59 188 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 P2RX4Q99571 388 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 MICU1Q9BPX6 476 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 MCRIP2Q9BUT9 160 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 FNDC11Q9BVV2 318 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 RTL8AQ9BWD3 113 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 SLC22A4Q9H015 551 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 KAT8Q9H7Z6 458 aaKnown RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 ZMAT4Q9H898 229 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 HEXA-AS1Q9H8Q6 139 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 SP140LQ9H930 580 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 NMNAT1Q9HAN9 279 aaPredicted RBP2.85□□□□□ -1.95
USP46-205ENST00000504078 EDA2RQ9HAV5 297 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 GPR173Q9NS66 373 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ING3Q9NXR8 418 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 USE1Q9NZ43 259 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 ZNF319Q9P2F9 582 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PITPNC1Q9UKF7 332 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PRDM4Q9UKN5 801 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 B9D1Q9UPM9 204 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 SIGLEC7Q9Y286 467 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 COMMD3-BMI1R4GMX3 469 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PCLOQ9Y6V0 5065 aa2.85□□□□□ -1.95
USP46-205ENST00000504078 PLECQ15149 4684 aaKnown RBP2.84□□□□□ -1.95
USP46-205ENST00000504078 TRBV4-1A0A0J9YWV2 114 aa2.84□□□□□ -1.95
USP46-205ENST00000504078 OR6C68A6NDL8 312 aa2.84□□□□□ -1.95
USP46-205ENST00000504078 UNC119BA6NIH7 251 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms