RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MTCP1P56278 107 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 Q499Y3 187 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 LYPD2Q6UXB3 125 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 FAM90A1Q86YD7 464 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 SPARTQ8N0X7 666 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 MUC20Q8N307 709 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-205ENST00000503401 OR5T2Q8NGG2 359 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 OR10Z1Q8NGY1 313 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 UFD1Q92890 307 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 MGLLQ99685 303 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 NIPBLQ6KC79 2804 aaeCLIP13.79□□□□□ -0.2
SCLT1-205ENST00000503401 SULT1B1O43704 296 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 TFF1P04155 84 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 HEXAP06865 529 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 PRKACBP22694 351 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 POU3F4P49335 361 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 GZMKP49863 264 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 CYB5R2Q6BCY4 276 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 OR5D18Q8NGL1 313 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 ZNF671Q8TAW3 534 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 TMEM203Q969S6 136 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 SPSB1Q96BD6 273 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 RAB39BQ96DA2 213 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 NKX3-1Q99801 234 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-205ENST00000503401 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
SCLT1-205ENST00000503401 LRCH1Q9Y2L9 728 aa13.79□□□□□ -0.2
SCLT1-205ENST00000503401 HIVEP2P31629 2446 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 TRAV38-1A0A0B4J264 116 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 ZNF879B4DU55 563 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 SPRY1O43609 319 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-205ENST00000503401 TGFAP01135 160 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 CD1AP06126 327 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 HCKP08631 526 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 RPS2P15880 293 aaKnown RBP13.78□□□□□ -0.2
SCLT1-205ENST00000503401 RAB3AP20336 220 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 GLRA1P23415 457 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 ATP1B3P54709 279 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 MLLT11Q13015 90 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-205ENST00000503401 MICBQ29980 383 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 TEX36Q5VZQ5 186 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 CRIP3Q6Q6R5 217 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 LHFPL2Q6ZUX7 228 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 SLC25A26Q70HW3 274 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 ZNF367Q7RTV3 350 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 DNAAF1Q8NEP3 725 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 SLAMF9Q96A28 289 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 DNAJB11Q9UBS4 358 aa13.78□□□□□ -0.2
SCLT1-205ENST00000503401 A0A1B0GW55 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 MAGEA13PA6NCF6 341 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 PIN1P1O15428 100 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 CD5LO43866 347 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 MRPS14O60783 128 aaKnown RBP13.77□□□□□ -0.21
SCLT1-205ENST00000503401 FSTL3O95633 263 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L2P0CJ85 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L3P0CJ86 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L4P0CJ87 422 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L5P0CJ88 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L6P0CJ89 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L7P0CJ90 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 PGA5P0DJD9 388 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 PCMT1P22061 227 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 MPZP25189 248 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 RPS25P62851 125 aaKnown RBP13.77□□□□□ -0.21
SCLT1-205ENST00000503401 TPBGQ13641 420 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 ZNF773Q6PK81 442 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4L9Q6RFH8 374 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DCDC5Q6ZRR9 648 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 SVOPQ8N4V2 548 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 LINC01356Q8N9X3 169 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DERL3Q96Q80 235 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 PKIBQ9C010 78 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 MTCH1Q9NZJ7 389 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 DUX4Q9UBX2 424 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 POLDIP2Q9Y2S7 368 aa13.77□□□□□ -0.21
SCLT1-205ENST00000503401 TRAV8-7A0A075B6U6 113 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 TRBV5-7A0A0A0MS05 114 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 F5H0A9 414 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-205ENST00000503401 F8VVB4 439 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 F8VWA3 439 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 PHF1O43189 567 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-205ENST00000503401 ANGPTL7O43827 346 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 WNT2P09544 360 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 CPEP16870 476 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 ZFP36P26651 326 aaKnown RBP13.76□□□□□ -0.21
SCLT1-205ENST00000503401 LCN2P80188 198 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 IL24Q13007 206 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 KCTD21Q4G0X4 260 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 ACSM3Q53FZ2 586 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 FAM27D1Q5T7N8 215 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 SATL1Q86VE3 508 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 POC1AQ8NBT0 407 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 OR52N4Q8NGI2 321 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 TMIGD2Q96BF3 282 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 C1orf159Q96HA4 380 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 NOX4Q9NPH5 578 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 YAE1D1Q9NRH1 226 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 CTSZQ9UBR2 303 aa13.76□□□□□ -0.21
SCLT1-205ENST00000503401 MIOXQ9UGB7 285 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms