RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 TRGV3P03979 118 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 OR4Q2P0C623 313 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 PTHLHP12272 177 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 MLNP12872 115 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 GSTM3P21266 225 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 CRABP2P29373 138 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 GPR1P46091 355 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 ELOCQ15369 112 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 GABRA6Q16445 453 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 TMEM53Q6P2H8 277 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 Q6ZQT7 251 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 BZW1Q7L1Q6 419 aaKnown RBP0.8□□□□□ -2.28
SMAD1-203ENST00000502342 NDUFAF7Q7L592 441 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 TMEM25Q86YD3 366 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 AMN1Q8IY45 258 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 RPRMLQ8N4K4 120 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 BPIFB6Q8NFQ5 453 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 OR4K13Q8NH42 304 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 FAM19A4Q96LR4 140 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 TRIB3Q96RU7 358 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 AGMATQ9BSE5 352 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 LRRC19Q9H756 370 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 GEMIN7Q9H840 131 aaKnown RBP0.8□□□□□ -2.28
SMAD1-203ENST00000502342 ZC4H2Q9NQZ6 224 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 MRPL16Q9NX20 251 aaKnown RBP0.8□□□□□ -2.28
SMAD1-203ENST00000502342 MYEF2Q9P2K5 600 aaKnown RBP0.8□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF780BQ9Y6R6 833 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 BRD4O60885 1362 aaPredicted RBP0.8□□□□□ -2.28
SMAD1-203ENST00000502342 PRRC2BQ5JSZ5 2229 aaKnown RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 TRGV4A0A0C4DH28 118 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 GMNCA6NCL1 334 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF729A6NN14 1252 aaPredicted RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 G3V3Q6 166 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 NDUFS5O43920 106 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ERLIN1O75477 346 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 CTAG2O75638 210 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 SNX4O95219 450 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 TTC4O95801 387 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 CATP04040 527 aaKnown RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 PRB1P04280 392 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 UBCP0CG48 685 aaKnown RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 GFAPP14136 432 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ARL2P36404 184 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 CFHR2P36980 270 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF83P51522 516 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 CCL23P55773 120 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 RPL10AP62906 217 aaKnown RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 SLC35A1P78382 337 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 FBXL19-AS1Q494R0 122 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 PCOTHQ58A44 107 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 BEX5Q5H9J7 111 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 TMEM220Q6QAJ8 160 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 MSRB3Q8IXL7 192 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF567Q8N184 647 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ZCCHC24Q8N2G6 241 aaKnown RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 KIF2BQ8N4N8 673 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 PQLC3Q8N755 202 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 OR5H2Q8NGV7 314 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 OR10Z1Q8NGY1 313 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 OR8S1Q8NH09 359 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 SMARCD1Q96GM5 515 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 C9orf72Q96LT7 481 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 MRPL20Q9BYC9 149 aaKnown RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ARV1Q9H2C2 271 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 TUBA4BQ9H853 241 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 PXMP2Q9NR77 195 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 NAGKQ9UJ70 344 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF443Q9Y2A4 671 aaPredicted RBP0.79□□□□□ -2.28
SMAD1-203ENST00000502342 PLXNB3Q9ULL4 1909 aa0.79□□□□□ -2.28
SMAD1-203ENST00000502342 NUP205Q92621 2012 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 A0A075B6Q4 140 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 TRAV8-4A0A0B4J246 113 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 A0A0B4J2E0 115 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 HACD1B0YJ81 288 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 ZBTB5O15062 677 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 IGKV1D-33P01593 117 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 IGKV1-33P01594 117 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 P01737 135 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 SNRPAP09012 282 aaKnown RBP0.78□□□□□ -2.28
SMAD1-203ENST00000502342 ARL14EPLP0DKL9 152 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 TEAD1P28347 426 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 SLC18A1P54219 525 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 YWHAEP62258 255 aaKnown RBP0.78□□□□□ -2.28
SMAD1-203ENST00000502342 RPL18AQ02543 176 aaKnown RBP0.78□□□□□ -2.28
SMAD1-203ENST00000502342 LAMTOR4Q0VGL1 99 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 DNAJC3Q13217 504 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 ITIH4Q14624 930 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 RPEL1Q2QD12 228 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 TTMPQ5BVD1 217 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 FAM231DQ6ZW35 169 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 LYPD6Q86Y78 171 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 APRG1Q8IVJ8 170 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 C3orf22Q8N5N4 141 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 CYB561A3Q8NBI2 242 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 CCDC148Q8NFR7 591 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 C2orf15Q8WU43 125 aaKnown RBP0.78□□□□□ -2.28
SMAD1-203ENST00000502342 TSEN15Q8WW01 171 aaKnown RBP0.78□□□□□ -2.28
SMAD1-203ENST00000502342 BAALCQ8WXS3 180 aa0.78□□□□□ -2.28
SMAD1-203ENST00000502342 APOBEC3DQ96AK3 386 aaPredicted RBP0.78□□□□□ -2.28
SMAD1-203ENST00000502342 UBE2E2Q96LR5 201 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms