RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 YIPF5Q969M3 257 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 PPP1R14BQ96C90 147 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 CCDC120Q96HB5 630 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 CXXC4Q9H2H0 198 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 DPAGT1Q9H3H5 408 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.25□□□□□ -1.25
SF3A1-210ENST00000498259 MTFP1Q9UDX5 166 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 POU2F3Q9UKI9 436 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ZDHHC8Q9ULC8 765 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 HSF4Q9ULV5 492 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 EDARQ9UNE0 448 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 PLEKHA6Q9Y2H5 1048 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 RBMX2Q9Y388 322 aaKnown RBP7.25□□□□□ -1.25
SF3A1-210ENST00000498259 MGAQ8IWI9 3026 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 LINC00854A0A1B0GVQ3 168 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 POM121CA8CG34 1229 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 H7C1Q1 480 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 J3QT63 122 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 RAB27BO00194 218 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 ATXN7O15265 892 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 PFDN1O60925 122 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 DHFRP00374 187 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 IGHV3-13P01766 116 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 GLAP06280 429 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 CD3GP09693 182 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 AKAIN1P0CW23 69 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 HIST1H1DP16402 221 aaKnown RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 MPZP25189 248 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 BLVRBP30043 206 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 SRP9P49458 86 aaKnown RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 EFNB2P52799 333 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 UNC119Q13432 240 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 RBM39Q14498 530 aaKnown RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 ZMYND11Q15326 602 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 PCGF3Q3KNV8 242 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 C4orf17Q53FE4 359 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 FAM76BQ5HYJ3 339 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 NHLRC3Q5JS37 347 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 FAM209AQ5JX71 171 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 HAGHLQ6PII5 290 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 SLC22A25Q6T423 547 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 CCBE1Q6UXH8 406 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 DNM1P46Q6ZS02 220 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 FJX1Q86VR8 437 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 TMEM17Q86X19 198 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 WFDC8Q8IUA0 241 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 IZUMO1Q8IYV9 350 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 CELF2-AS1Q8N7Q2 184 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 TMEM229BQ8NBD8 167 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 ACBD4Q8NC06 268 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 DUSP18Q8NEJ0 188 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 Q8NFD4 153 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 OR52I2Q8NH67 350 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 AQP3Q92482 292 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 TRIM63Q969Q1 353 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 CREB3L1Q96BA8 519 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 LPAR5Q9H1C0 372 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 RIMS4Q9H426 269 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF442Q9H7R0 627 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 MYEF2Q9P2K5 600 aaKnown RBP7.24□□□□□ -1.25
SF3A1-210ENST00000498259 DUSP13Q9UII6 198 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 SCP2D1Q9UJQ7 156 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 ST3GAL6Q9Y274 331 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 CELSR3Q9NYQ7 3312 aa7.24□□□□□ -1.25
SF3A1-210ENST00000498259 FREM1Q5H8C1 2179 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 PRRC2CQ9Y520 2896 aaKnown RBP7.23□□□□□ -1.25
SF3A1-210ENST00000498259 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 ANKRD20A5PA0PJZ0 165 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 TUBAL3A6NHL2 446 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF736B4DX44 427 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-210ENST00000498259 DISC1C4P0D8 188 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 PLATP00750 562 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 IFNA6P05013 189 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 CD3EP07766 207 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 FUT3P21217 361 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 RAG2P55895 527 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 TAS2R46P59540 309 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 FGF12P61328 243 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 DGCR2P98153 550 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 IL13RA2Q14627 380 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 NKPD1Q17RQ9 610 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF260Q3ZCT1 412 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 BEX5Q5H9J7 111 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 SPIN3Q5JUX0 258 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 OR10K2Q6IF99 312 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 GDPD3Q7L5L3 318 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 NRARPQ7Z6K4 114 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 DTX3Q8N9I9 347 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 TMEM104Q8NE00 496 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 PRR7Q8TB68 274 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 GPX8Q8TED1 209 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 HPSE2Q8WWQ2 592 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 ERGIC1Q969X5 290 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 SEH1LQ96EE3 360 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 Q96M66 194 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 C1orf147Q96MC9 270 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-210ENST00000498259 SCGB3A2Q96PL1 93 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 PRRT1Q99946 306 aa7.23□□□□□ -1.25
SF3A1-210ENST00000498259 CHST6Q9GZX3 395 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms