RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 OR4Q2P0C623 313 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 NTF3P20783 257 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 CD9P21926 228 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 PAX6P26367 422 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 GPR4P46093 362 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 MAD2L1BPQ15013 274 aaPredicted RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 MED27Q6P2C8 311 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 MORN3Q6PF18 240 aaPredicted RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 EPGNQ6UW88 154 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 CASP12Q6UXS9 341 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 SETD3Q86TU7 594 aaPredicted RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 ST13P4Q8IZP2 240 aaPredicted RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 LYPD1Q8N2G4 141 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 ZCCHC24Q8N2G6 241 aaKnown RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 OR52N1Q8NH53 320 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 DOK4Q8TEW6 326 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 ORAOV1Q8WV07 137 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 C20orf144Q9BQM9 153 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 UTP23Q9BRU9 249 aaKnown RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 ING2Q9H160 280 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 SDHAF2Q9NX18 166 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 MARCOQ9UEW3 520 aaPredicted RBP2.25□□□□□ -2.05
SMC4-225ENST00000497203 PRO0628Q9UI54 55 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 RAB22AQ9UL26 194 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 AK9Q5TCS8 1911 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 LOXHD1Q8IVV2 1947 aa2.25□□□□□ -2.05
SMC4-225ENST00000497203 TMEM131Q92545 1883 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 DYSFO75923 2080 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 TRIP11Q15643 1979 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 LOC102724200A0A096LPH7 203 aaPredicted RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 ZNF98A6NK75 572 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 PRAMEF26H0Y7S4 382 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 LGALS9O00182 355 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 IGLV3-19P01714 112 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 APOA1P02647 267 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 SNRPAP09012 282 aaKnown RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 ZNF14P17017 642 aaPredicted RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 P2RY2P41231 377 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 HTR2BP41595 481 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 IDH2P48735 452 aaKnown RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 DNASE1L1P49184 302 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 OR12D2P58182 307 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 DSTNP60981 165 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 DYNC1I2Q13409 638 aaKnown RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 NT5DC3Q86UY8 548 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 BBS7Q8IWZ6 715 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 NELFCDQ8IXH7 590 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 SLC26A10Q8NG04 563 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 OR2M7Q8NG81 312 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 KLF14Q8TD94 323 aaPredicted RBP2.24□□□□□ -2.05
SMC4-225ENST00000497203 CACNG8Q8WXS5 425 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 CDKL2Q92772 493 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 HGDQ93099 445 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 WDR34Q96EX3 536 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 RILPQ96NA2 401 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 CTRCQ99895 268 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 SCRT1Q9BWW7 348 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 CHRNA10Q9GZZ6 450 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 SLC38A1Q9H2H9 487 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 PRORYQ9H606 182 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 WIF1Q9Y5W5 379 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 SCN4AP35499 1836 aa2.24□□□□□ -2.05
SMC4-225ENST00000497203 GPR179Q6PRD1 2367 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 TICRRQ7Z2Z1 1910 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 IGHV3OR16-8A0A075B7F1 116 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 SLC5A10A0PJK1 596 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 RAB19A4D1S5 217 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 TVP23AA6NH52 213 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 CEACAM18A8MTB9 384 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 BOLA2-SMG1P6H3BVE0 249 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 RNF113AO15541 343 aaKnown RBP2.23□□□□□ -2.05
SMC4-225ENST00000497203 LIPCP11150 499 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 ATP5J2P56134 94 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 RPL10AP62906 217 aaKnown RBP2.23□□□□□ -2.05
SMC4-225ENST00000497203 IL5RAQ01344 420 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 ATP5G2Q06055 141 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 KRTAP13-2Q52LG2 175 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 UGT2A3Q6UWM9 527 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 PDPNQ86YL7 162 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 STK40Q8N2I9 435 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 OR51Q1Q8NH59 317 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 LGALS14Q8TCE9 139 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 C19orf60Q96EN9 201 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 ZFP3Q96NJ6 502 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 METTL26Q96S19 204 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 PDCD1LG2Q9BQ51 273 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 RHOXF2Q9BQY4 288 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 ZNF649Q9BS31 505 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 COPS4Q9BT78 406 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 MRPL20Q9BYC9 149 aaKnown RBP2.23□□□□□ -2.05
SMC4-225ENST00000497203 RAB1BQ9H0U4 201 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 STMN3Q9NZ72 180 aa2.23□□□□□ -2.05
SMC4-225ENST00000497203 FAM25EA8MYX2 175 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 C9JQL5 133 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms