RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 TRAV8-4A0A0B4J246 113 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 A0A0J9YXV3 536 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 M0R036 132 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 TBL1XO60907 577 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 CIAO1O76071 339 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 SNAPINO95295 136 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 SLC25A27O95847 323 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 P01737 135 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 ERGP11308 486 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 RCC1P18754 421 aaPredicted RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 RPS12P25398 132 aaKnown RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 RPA3P35244 121 aaPredicted RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 TAS2R19P59542 299 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 MRPS25P82663 173 aaKnown RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 GUCA2BQ16661 112 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 SPIN4Q56A73 249 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 SYT6Q5T7P8 510 aaPredicted RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 ZCCHC24Q8N2G6 241 aaKnown RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 OR6N1Q8NGY5 312 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 OR51Q1Q8NH59 317 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 LINC01006Q8NI28 216 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 ZFP90Q8TF47 636 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 MAGEB18Q96M61 343 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 RBP7Q96R05 134 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 METTL9Q9H1A3 318 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 MS4A6AQ9H2W1 248 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 EDA2RQ9HAV5 297 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 MYOZ1Q9NP98 299 aaPredicted RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 MRPL40Q9NQ50 206 aaKnown RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 PLSCR3Q9NRY6 295 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 PRO0461Q9UI25 63 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 SLC7A11Q9UPY5 501 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 ALG5Q9Y673 324 aa3.34□□□□□ -1.88
SNX13-211ENST00000496855 TDRD6O60522 2096 aaKnown RBP3.34□□□□□ -1.88
SNX13-211ENST00000496855 WDR62O43379 1518 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 ZFP92A6NM28 416 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 PGRMC1O00264 195 aaKnown RBP3.33□□□□□ -1.88
SNX13-211ENST00000496855 FOXH1O75593 365 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 RP2O75695 350 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 TNFSF13O75888 250 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 SLC22A5O76082 557 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 IGHV3-23P01764 117 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 RLN2P04090 185 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 CALB1P05937 261 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 SLC35G6P0C7Q6 338 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 CELP19835 753 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 IFNGR2P38484 337 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 RPS9P46781 194 aaKnown RBP3.33□□□□□ -1.88
SNX13-211ENST00000496855 ARF6P62330 175 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 TTLL9Q3SXZ7 439 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 KCTD16Q68DU8 428 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 ZNF544Q6NX49 715 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 ZNF530Q6P9A1 599 aaPredicted RBP3.33□□□□□ -1.88
SNX13-211ENST00000496855 PLET1Q6UQ28 207 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 PEX26Q7Z412 305 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 OAFQ86UD1 273 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 C10orf107Q8IVU9 208 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 OR5B17Q8NGF7 314 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 OR2G3Q8NGZ4 309 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 ERMNQ8TAM6 284 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 DTD1Q8TEA8 209 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 RAB8BQ92930 207 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 TLCD1Q96CP7 247 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 AURKBQ96GD4 344 aaPredicted RBP3.33□□□□□ -1.88
SNX13-211ENST00000496855 STACQ99469 402 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 SULT4A1Q9BR01 284 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 RBM22Q9NW64 420 aaKnown RBP eCLIP3.33□□□□□ -1.88
SNX13-211ENST00000496855 MMACHCQ9Y4U1 282 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 FLVCR1Q9Y5Y0 555 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 TNRQ92752 1358 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 RAB3GAP2Q9H2M9 1393 aa3.33□□□□□ -1.88
SNX13-211ENST00000496855 ZNF608Q9ULD9 1512 aaPredicted RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 LOC105371267A0A1B0GV96 52 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 CCRL2O00421 344 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 PFDN6O15212 129 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 SLC31A2O15432 143 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 ISG15P05161 165 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 BCHEP06276 602 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 ELK1P19419 428 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 M6PRP20645 277 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 WARSP23381 471 aaKnown RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 CXCR1P25024 350 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 PSMA1P25786 263 aaKnown RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 PMELP40967 661 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 P2RY4P51582 365 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 TOMM34Q15785 309 aaPredicted RBP3.32□□□□□ -1.88
SNX13-211ENST00000496855 CHRFAM7AQ494W8 412 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 TMEM236Q5W0B7 351 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 LPCAT4Q643R3 524 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 CALHM1Q8IU99 346 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 CCDC112Q8NEF3 446 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 ZNF680Q8NEM1 530 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 OR4C13Q8NGP0 309 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 OR1N2Q8NGR9 330 aa3.32□□□□□ -1.88
SNX13-211ENST00000496855 DDIT4LQ96D03 193 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms