RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 M0R296 226 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 SDCBPO00560 298 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 ZP3P21754 424 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 BAMBIQ13145 260 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 SLC9A3R2Q15599 337 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 OR1S1Q8NH92 325 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 MAFIPQ8WZ33 124 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 WBP1Q96G27 269 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 RTBDNQ9BSG5 229 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF471Q9BX82 626 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 REG4Q9BYZ8 158 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 NARFLQ9H6Q4 476 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 PCDHB16Q9NRJ7 776 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 MBD2Q9UBB5 411 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 hCG_38984A0A1B0GV85 526 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ZSCAN5BA6NJL1 495 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 RRP8O43159 456 aaKnown RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 SPRY1O43609 319 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ANGPTL7O43827 346 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 SYNGR4O95473 234 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ITGA3P26006 1051 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 LUMP51884 338 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 FUT6P51993 359 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 FAM3AP98173 230 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 SRYQ05066 204 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 RPUSD3Q6P087 351 aaKnown RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 MRPS24Q96EL2 167 aaKnown RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 SIGLEC12Q96PQ1 595 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ARPC5LQ9BPX5 153 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 LINC00470Q9BZP3 86 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ATPIF1Q9UII2 106 aa9.63□□□□□ -0.87
CMSS1-208ENST00000496116 MCTS1Q9ULC4 181 aaKnown RBP9.63□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF816-ZNF321PA0A0X1KG74 233 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 B8ZZF3 427 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PLATP00750 562 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 MMP7P09237 267 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PGAM2P15259 253 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PI3P19957 117 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 LHX2P50458 406 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 OR1C1Q15619 314 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 STK11Q15831 433 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 TAF9Q16594 264 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 BEX5Q5H9J7 111 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 DCAF10Q5QP82 559 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 TSPO2Q5TGU0 170 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 CDCP2Q5VXM1 449 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 ASCL4Q6XD76 172 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 HSD17B13Q7Z5P4 300 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 ZSCAN4Q8NAM6 433 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PXT1Q8NFP0 134 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 FGFBP3Q8TAT2 258 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 CCDC120Q96HB5 630 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PRDM14Q9GZV8 571 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 METTL8Q9H825 291 aaKnown RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 RASL12Q9NYN1 266 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 CSAG2Q9Y5P2 127 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 KCNMB2Q9Y691 235 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 F5H0A9 414 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 MT-CO3P00414 261 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PET100P0DJ07 73 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 CD59P13987 128 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 GLRA1P23415 457 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 DTYMKP23919 212 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 NUP62P37198 522 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 SUPT4H1P63272 117 aaKnown RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF92Q03936 586 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 AIMP2Q13155 320 aaKnown RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 OR8B8Q15620 311 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PABPC1L2AQ5JQF8 200 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 PLA2G2CQ5R387 149 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 DCUN1D4Q92564 292 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 CYYR1Q96J86 154 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 IP6K3Q96PC2 410 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 CMSS1Q9BQ75 279 aaKnown RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF2Q9BSG1 426 aaPredicted RBP9.62□□□□□ -0.87
CMSS1-208ENST00000496116 C1QTNF5Q9BXJ0 243 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 IL36GQ9NZH8 169 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 ANXA10Q9UJ72 324 aa9.62□□□□□ -0.87
CMSS1-208ENST00000496116 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 A8MXK9 166 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF587BE7ETH6 402 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 TERTO14746 1132 aaKnown RBP9.61□□□□□ -0.87
CMSS1-208ENST00000496116 GPR37O15354 613 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 KNG1P01042 644 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 IGHV3-9P01782 118 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF708P17019 499 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 RFC3P40938 356 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 CLDN18P56856 261 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PLGLB1Q02325 96 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PLCXD3Q63HM9 321 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 MOB3CQ70IA8 216 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 OSR2Q8N2R0 312 aa9.61□□□□□ -0.87
CMSS1-208ENST00000496116 EIF4E3Q8N5X7 224 aaKnown RBP9.61□□□□□ -0.87
CMSS1-208ENST00000496116 PIGCQ92535 297 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms